Variant report

rSNPs within LD-proxies of this variant (count:10)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024920	chr7:120002420-120083753	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv516686	chr7:120015843-120223084	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv1026821	chr7:120020317-120190437	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120041000-120043200	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr7:120041200-120043200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:120041200-120043400	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr7:120041600-120044800	Enhancers	NHEK	skin
5	chr7:120041800-120043400	Enhancers	Muscle Satellite Cultured Cells	--
6	chr7:120041800-120043400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr7:120042000-120043400	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr7:120042000-120044600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr7:120042200-120043400	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr7:120042200-120043400	Enhancers	Rectal Smooth Muscle	rectum
11	chr7:120042200-120043400	Enhancers	NH-A	brain
12	chr7:120042200-120044200	Enhancers	HMEC	breast
13	chr7:120042200-120044800	Enhancers	Hela-S3	cervix
14	chr7:120042400-120043200	Enhancers	iPS-20b Cell Line	embryonic stem cell
15	chr7:120042400-120043200	Enhancers	Colon Smooth Muscle	Colon
16	chr7:120042600-120043600	Enhancers	HUVEC	blood vessel
17	chr7:120042600-120044800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr7:120042800-120043400	Flanking Active TSS	GM12878-XiMat	blood
19	chr7:120042800-120043800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr7:120043000-120043200	Enhancers	Stomach Mucosa	stomach
21	chr7:120043000-120044400	Weak transcription	HUES64 Cell Line	embryonic stem cell

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