Variant report

Variant	rs56680932
Chromosome Location	chr8:114528563-114528564
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11990983	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991807	1.00[AMR][1000 genomes]
rs56018925	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56961237	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73701479	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73701480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73701481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7462917	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv817379	chr8:114338391-115011632	Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv831429	chr8:114438561-114595565	Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:114527600-114528600	Enhancers	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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