Variant report

Variant	rs56763182
Chromosome Location	chr10:22570416-22570417
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12254097	1.00[EUR][1000 genomes]
rs16922378	1.00[EUR][1000 genomes]
rs55989541	1.00[EUR][1000 genomes]
rs57651597	1.00[AMR][1000 genomes]
rs58604203	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59543181	1.00[EUR][1000 genomes]
rs60632833	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61086333	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7079151	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73596575	1.00[AMR][1000 genomes]
rs73596580	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825292	chr10:22560347-22642200	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22569400-22570800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:22570000-22571200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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