The 2.0 version of rSNPBase

Variant report

Variant rs56802741
Chromosome Location chr12:118775767-118775768
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:118720800-118793600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:118746000-118783200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr12:118746200-118785000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr12:118752800-118783200 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr12:118754600-118782200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr12:118767400-118778600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr12:118768400-118776600 Weak transcription Fetal Stomach stomach
8 chr12:118768800-118775800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr12:118768800-118790400 Weak transcription Primary T cells from cord blood blood
10 chr12:118769000-118778000 Weak transcription Stomach Mucosa stomach
11 chr12:118769000-118783200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr12:118769000-118783200 Weak transcription Brain Anterior Caudate brain
13 chr12:118769000-118784000 Weak transcription Duodenum Mucosa Duodenum
14 chr12:118769200-118776200 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr12:118769200-118776600 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr12:118769200-118782000 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr12:118769200-118783200 Weak transcription Gastric stomach
18 chr12:118769200-118785000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr12:118769200-118785800 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr12:118769200-118791000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr12:118769800-118782600 Weak transcription Fetal Intestine Small intestine
22 chr12:118770000-118785200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr12:118770600-118776200 Weak transcription K562 blood
24 chr12:118770600-118780400 Weak transcription Primary B cells from peripheral blood blood
25 chr12:118771800-118776600 Weak transcription Primary hematopoietic stem cells blood
26 chr12:118773000-118775800 Enhancers Osteobl bone
27 chr12:118773000-118776200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr12:118773200-118776400 Enhancers Hela-S3 cervix
29 chr12:118773600-118780400 Weak transcription Primary T cells fromperipheralblood blood
30 chr12:118773800-118777000 Enhancers NHDF-Ad bronchial
31 chr12:118774000-118776200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:118774000-118792400 Weak transcription Dnd41 blood
33 chr12:118774200-118776200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:118774200-118776800 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr12:118774200-118782000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr12:118774600-118776000 Strong transcription Primary B cells from cord blood blood
37 chr12:118774600-118776400 Enhancers Fetal Lung lung
38 chr12:118774800-118775800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr12:118774800-118775800 Flanking Active TSS A549 lung
40 chr12:118774800-118783200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr12:118775000-118775800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr12:118775000-118775800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr12:118775000-118775800 Enhancers Muscle Satellite Cultured Cells --
44 chr12:118775000-118777000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr12:118775200-118776200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr12:118775400-118777000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr12:118775600-118775800 Enhancers Primary hematopoietic stem cells short term culture blood
48 chr12:118775600-118776400 Enhancers NHLF lung
49 chr12:118775600-118776600 Enhancers GM12878-XiMat blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015