Variant report

Variant rs568615876
Chromosome Location chr5:180240878-180240879
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180237800-180241800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
2 chr5:180238200-180245000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr5:180238400-180242200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr5:180238400-180243400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:180238400-180243600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr5:180238600-180242200 Weak transcription Fetal Kidney kidney
7 chr5:180238600-180243600 Weak transcription NH-A brain
8 chr5:180238600-180244000 Weak transcription HSMMtube muscle
9 chr5:180238600-180244000 Weak transcription NHLF lung
10 chr5:180238800-180242000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:180238800-180242200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr5:180238800-180242200 Weak transcription Osteobl bone
13 chr5:180238800-180243600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr5:180238800-180243600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr5:180238800-180243600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr5:180238800-180243800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr5:180238800-180243800 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr5:180238800-180243800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr5:180238800-180243800 Weak transcription NHDF-Ad bronchial
20 chr5:180238800-180253200 Weak transcription A549 lung
21 chr5:180239000-180241000 Weak transcription Colonic Mucosa Colon
22 chr5:180239000-180241200 Weak transcription Brain Anterior Caudate brain
23 chr5:180239000-180242000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr5:180239000-180242000 Weak transcription Right Ventricle heart
25 chr5:180239000-180242000 Weak transcription Spleen Spleen
26 chr5:180239000-180242200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:180239000-180242200 Weak transcription HUVEC blood vessel
28 chr5:180239000-180242400 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr5:180239000-180243000 Active TSS Right Atrium heart
30 chr5:180239000-180243400 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr5:180239000-180243600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr5:180239000-180243600 Weak transcription HUES6 Cell Line embryonic stem cell
33 chr5:180239000-180243600 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr5:180239000-180243600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr5:180239000-180243600 Weak transcription Fetal Stomach stomach
36 chr5:180239000-180244000 Weak transcription Placenta Amnion Placenta Amnion
37 chr5:180239000-180244800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr5:180239000-180245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr5:180239000-180247400 Weak transcription Brain Substantia Nigra brain
40 chr5:180239200-180241000 Weak transcription Stomach Smooth Muscle stomach
41 chr5:180239200-180241400 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr5:180239200-180241400 Weak transcription Fetal Muscle Trunk muscle
43 chr5:180239200-180241400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr5:180239200-180241600 Weak transcription Lung lung
45 chr5:180239200-180242000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr5:180239200-180242000 Active TSS Adipose Nuclei Adipose
47 chr5:180239200-180242000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr5:180239200-180242000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr5:180239200-180242200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr5:180239200-180242200 Weak transcription Primary neutrophils fromperipheralblood blood

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