Variant report

Variant rs569167009
Chromosome Location chr5:180261391-180261392
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259000-180264400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:180259000-180272600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:180259400-180261400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr5:180259400-180261400 Weak transcription Aorta Aorta
5 chr5:180259400-180261600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr5:180259400-180261600 Weak transcription Fetal Intestine Large intestine
7 chr5:180259400-180261600 Weak transcription Ovary ovary
8 chr5:180259400-180262200 Weak transcription HSMMtube muscle
9 chr5:180259400-180263600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr5:180259400-180271400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:180259600-180261400 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr5:180259600-180262000 Weak transcription HSMM muscle
14 chr5:180259600-180264600 Weak transcription HMEC breast
15 chr5:180259600-180272400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:180259600-180272600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:180259800-180262000 Weak transcription Fetal Brain Female brain
18 chr5:180259800-180262000 Weak transcription Fetal Lung lung
19 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr5:180260000-180261400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr5:180260000-180261400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
22 chr5:180260000-180261400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr5:180260000-180261400 Weak transcription Esophagus oesophagus
24 chr5:180260000-180261400 Weak transcription Fetal Stomach stomach
25 chr5:180260000-180261400 Weak transcription Gastric stomach
26 chr5:180260000-180261400 Weak transcription Placenta Amnion Placenta Amnion
27 chr5:180260000-180261600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr5:180260000-180261600 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr5:180260000-180261600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr5:180260000-180261600 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr5:180260000-180261600 Weak transcription Right Ventricle heart
32 chr5:180260000-180261600 Weak transcription A549 lung
33 chr5:180260000-180261600 Weak transcription Osteobl bone
34 chr5:180260000-180261800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr5:180260000-180261800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr5:180260000-180261800 Weak transcription Brain Angular Gyrus brain
37 chr5:180260000-180261800 Weak transcription NHLF lung
38 chr5:180260000-180262000 Weak transcription Pancreas Pancrea
39 chr5:180260000-180264000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr5:180260000-180268800 Weak transcription Brain Germinal Matrix brain
41 chr5:180260000-180271400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
44 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --
45 chr5:180260000-180274400 Weak transcription NHDF-Ad bronchial
46 chr5:180260000-180276200 Weak transcription Stomach Mucosa stomach
47 chr5:180260200-180261400 Enhancers Primary T cells from cord blood blood
48 chr5:180260200-180261400 Enhancers Primary T helper cells PMA-I stimulated --
49 chr5:180260200-180261400 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr5:180260200-180261400 Weak transcription Brain Hippocampus Middle brain

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