Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:31863201..31865350-chr2:31867005..31868551,2	K562	blood:
2	chr2:31863201..31864771-chr2:31866576..31868505,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11124266	0.80[AFR][1000 genomes]
rs12479192	0.83[AFR][1000 genomes]
rs2268799	0.81[ASN][1000 genomes]
rs2754530	0.81[ASN][1000 genomes]
rs499362	0.85[ASN][1000 genomes]
rs502139	0.85[ASN][1000 genomes]
rs522638	0.82[EUR][1000 genomes]
rs523349	0.88[EUR][1000 genomes]
rs524345	0.88[AFR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs527112	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs539213	0.84[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs553464	0.92[ASN][1000 genomes]
rs559555	0.85[ASN][1000 genomes]
rs589427	0.83[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs599300	0.85[ASN][1000 genomes]
rs607294	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs608574	0.80[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs623419	0.81[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs632148	0.82[EUR][1000 genomes]
rs676033	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs681482	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs682895	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs765138	0.81[ASN][1000 genomes]
rs806645	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532648	chr2:31591498-32312698	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
2	nsv1005565	chr2:31603134-31868877	Genic enhancers Active TSS Bivalent Enhancer Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1002988	chr2:31767131-31996924	Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv961024	chr2:31814613-31870845	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
5	esv3376782	chr2:31861607-32046180	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:31861000-31873600	Weak transcription	Liver	Liver

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