Variant report

Variant rs569431552
Chromosome Location chr5:180261171-180261172
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180259000-180264400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:180259000-180272600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr5:180259400-180261400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr5:180259400-180261400 Weak transcription Aorta Aorta
5 chr5:180259400-180261600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr5:180259400-180261600 Weak transcription Fetal Intestine Large intestine
7 chr5:180259400-180261600 Weak transcription Ovary ovary
8 chr5:180259400-180262200 Weak transcription HSMMtube muscle
9 chr5:180259400-180263600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr5:180259400-180271400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr5:180259400-180273600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:180259600-180261400 Enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr5:180259600-180262000 Weak transcription HSMM muscle
14 chr5:180259600-180264600 Weak transcription HMEC breast
15 chr5:180259600-180272400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:180259600-180272600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:180259800-180261200 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr5:180259800-180262000 Weak transcription Fetal Brain Female brain
19 chr5:180259800-180262000 Weak transcription Fetal Lung lung
20 chr5:180259800-180276800 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr5:180260000-180261200 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr5:180260000-180261200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:180260000-180261200 Weak transcription Fetal Intestine Small intestine
24 chr5:180260000-180261200 Weak transcription Placenta Placenta
25 chr5:180260000-180261200 Enhancers Skeletal Muscle Male skeletal muscle
26 chr5:180260000-180261400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr5:180260000-180261400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
28 chr5:180260000-180261400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr5:180260000-180261400 Weak transcription Esophagus oesophagus
30 chr5:180260000-180261400 Weak transcription Fetal Stomach stomach
31 chr5:180260000-180261400 Weak transcription Gastric stomach
32 chr5:180260000-180261400 Weak transcription Placenta Amnion Placenta Amnion
33 chr5:180260000-180261600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr5:180260000-180261600 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr5:180260000-180261600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr5:180260000-180261600 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr5:180260000-180261600 Weak transcription Right Ventricle heart
38 chr5:180260000-180261600 Weak transcription A549 lung
39 chr5:180260000-180261600 Weak transcription Osteobl bone
40 chr5:180260000-180261800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr5:180260000-180261800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:180260000-180261800 Weak transcription Brain Angular Gyrus brain
43 chr5:180260000-180261800 Weak transcription NHLF lung
44 chr5:180260000-180262000 Weak transcription Pancreas Pancrea
45 chr5:180260000-180264000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr5:180260000-180268800 Weak transcription Brain Germinal Matrix brain
47 chr5:180260000-180271400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr5:180260000-180273200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr5:180260000-180273800 Weak transcription Fetal Kidney kidney
50 chr5:180260000-180274400 Weak transcription Muscle Satellite Cultured Cells --

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