Variant report

Variant	rs56956147
Chromosome Location	chr13:76912130-76912131
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12864604	0.81[ASN][1000 genomes]
rs17066119	0.86[EUR][1000 genomes]
rs9573834	0.85[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9573836	0.86[EUR][1000 genomes]
rs9573837	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9573849	0.82[ASN][1000 genomes]
rs9573854	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044736	chr13:76728655-77066435	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76910200-76912400	Enhancers	Rectal Smooth Muscle	rectum
2	chr13:76911200-76912200	Enhancers	Fetal Heart	heart
3	chr13:76912000-76912400	Enhancers	Colon Smooth Muscle	Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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