Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:42353303..42355552-chr14:42355900..42358356,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10142438	0.87[ASN][1000 genomes]
rs10142615	0.87[ASN][1000 genomes]
rs10431621	0.81[ASN][1000 genomes]
rs11846415	0.83[ASN][1000 genomes]
rs11848944	0.87[ASN][1000 genomes]
rs17112380	0.87[ASN][1000 genomes]
rs1951884	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1957869	0.87[ASN][1000 genomes]
rs2181736	0.87[ASN][1000 genomes]
rs2224838	0.92[ASN][1000 genomes]
rs34015992	0.83[EUR][1000 genomes]
rs4243699	0.86[ASN][1000 genomes]
rs4904978	0.92[ASN][1000 genomes]
rs6572117	0.90[ASN][1000 genomes]
rs721222	0.92[ASN][1000 genomes]
rs8015744	0.81[ASN][1000 genomes]
rs8020905	0.88[ASN][1000 genomes]
rs8022872	0.80[ASN][1000 genomes]
rs988740	0.88[ASN][1000 genomes]
rs988741	0.87[ASN][1000 genomes]
rs988805	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047300	chr14:41671653-42361098	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:42354400-42362600	Weak transcription	Fetal Muscle Leg	muscle
2	chr14:42355000-42368400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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