Variant report

Variant	rs10431621
Chromosome Location	chr14:42380728-42380729
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10133646	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10142438	0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10142615	0.95[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10431619	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10431620	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10431667	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11157254	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11846415	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11848944	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17112380	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17112395	0.80[AMR][1000 genomes]
rs1825712	0.80[ASN][1000 genomes]
rs1957869	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2181736	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2209228	0.82[ASN][1000 genomes]
rs2224838	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4243699	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4904978	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs55681342	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs57035834	0.81[ASN][1000 genomes]
rs6572117	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs721222	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8015744	0.84[ASN][1000 genomes]
rs8020905	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8022872	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs988740	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs988741	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs988805	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:42380000-42381200	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr14:42380000-42381400	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr14:42380200-42381000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr14:42380200-42381200	Active TSS	HUES64 Cell Line	embryonic stem cell
5	chr14:42380200-42381200	Active TSS	iPS-18 Cell Line	embryonic stem cell
6	chr14:42380200-42381400	Active TSS	iPS-15b Cell Line	embryonic stem cell
7	chr14:42380400-42381000	Active TSS	H9 Cell Line	embryonic stem cell
8	chr14:42380400-42381000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr14:42380400-42381000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr14:42380400-42381400	Active TSS	H1 Cell Line	embryonic stem cell
11	chr14:42380400-42381400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr14:42380400-42381400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr14:42380600-42381200	Active TSS	ES-WA7 Cell Line	embryonic stem cell
14	chr14:42380600-42381200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr14:42380600-42381200	Active TSS	HUES48 Cell Line	embryonic stem cell

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