Variant report

Variant	rs570468868
Chromosome Location	chr3:102251788-102251789
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007340	chr3:102108954-102725099	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv536676	chr3:102108954-102725099	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	nsv1009392	chr3:102199756-102631205	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
4	nsv3926	chr3:102213136-102257633	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv1843717	chr3:102251299-102364297	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:102244400-102255200	Weak transcription	Stomach Mucosa	stomach
2	chr3:102249000-102253000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr3:102251200-102252600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr3:102251400-102251800	Enhancers	Primary T killer memory cells from peripheral blood	blood
5	chr3:102251400-102252400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
6	chr3:102251400-102252600	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr3:102251400-102253000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr3:102251600-102251800	Enhancers	Primary B cells from peripheral blood	blood
9	chr3:102251600-102251800	Enhancers	Small Intestine	intestine
10	chr3:102251600-102252000	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr3:102251600-102252000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
12	chr3:102251600-102252200	Enhancers	Primary hematopoietic stem cells	blood
13	chr3:102251600-102252200	Enhancers	Monocytes-CD14+_RO01746	blood
14	chr3:102251600-102252600	Enhancers	Aorta	Aorta
15	chr3:102251600-102254200	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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