Variant report

Variant	rs57050614
Chromosome Location	chr4:54600537-54600538
allele	-/A/AA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10028338	0.93[AFR][1000 genomes]
rs28459143	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28484855	0.90[EUR][1000 genomes]
rs28589490	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28613767	0.90[EUR][1000 genomes]
rs6844085	0.83[ASN][1000 genomes]
rs728587	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv15357	chr4:54591392-54603209	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv879015	chr4:54596466-54665559	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54598400-54600600	Enhancers	NHDF-Ad	bronchial
2	chr4:54598400-54601000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:54598400-54601000	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr4:54598400-54602600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr4:54599200-54600800	Enhancers	Muscle Satellite Cultured Cells	--
6	chr4:54599400-54600600	Enhancers	NHLF	lung
7	chr4:54599600-54600600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr4:54600000-54600600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr4:54600000-54600600	Enhancers	Osteobl	bone
10	chr4:54600000-54600800	Enhancers	HUVEC	blood vessel
11	chr4:54600000-54601400	Enhancers	Colon Smooth Muscle	Colon
12	chr4:54600000-54603400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr4:54600200-54600800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr4:54600200-54602400	Enhancers	HSMM	muscle
15	chr4:54600400-54600600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr4:54600400-54600600	Enhancers	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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