Variant report

Variant	rs57066736
Chromosome Location	chr4:54567251-54567252
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs60077509	0.82[AMR][1000 genomes]
rs6811080	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2439697	chr4:54564973-54568229	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3331315	chr4:54565145-54568743	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv3346644	chr4:54565526-54567959	Enhancers Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	esv1996882	chr4:54565704-54567999	Weak transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3467117	chr4:54565730-54567888	Weak transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	esv3467118	chr4:54565730-54567888	Weak transcription Enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54555600-54568600	Weak transcription	Right Atrium	heart
2	chr4:54560400-54568000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
3	chr4:54560400-54568600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr4:54561600-54568400	Weak transcription	Fetal Brain Male	brain
5	chr4:54562000-54568600	Weak transcription	Placenta	Placenta
6	chr4:54562200-54568600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr4:54562400-54568600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
8	chr4:54564600-54568000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr4:54564800-54568400	Weak transcription	NHDF-Ad	bronchial
10	chr4:54564800-54568600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:54564800-54568600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr4:54566400-54568800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr4:54566800-54568600	Weak transcription	Gastric	stomach
14	chr4:54566800-54568600	Weak transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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