Variant report

Variant	rs571044355
Chromosome Location	chr13:62660386-62660387
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761266	chr13:61928642-62690828	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv948810	chr13:62003256-62968196	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
3	nsv900252	chr13:62502166-62687843	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv900255	chr13:62549703-62680229	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv832630	chr13:62651865-62811428	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
6	nsv561879	chr13:62655236-62666114	Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
7	nsv561884	chr13:62655365-62666114	Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:62659400-62660400	Enhancers	H1 Cell Line	embryonic stem cell
2	chr13:62659400-62660400	Enhancers	H9 Cell Line	embryonic stem cell
3	chr13:62659400-62660400	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr13:62659400-62660400	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr13:62659400-62660400	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr13:62659400-62660400	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr13:62659600-62660400	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr13:62659600-62660400	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr13:62659600-62660400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr13:62660000-62660400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr13:62660000-62660600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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