The 2.0 version of rSNPBase

Variant report

Variant rs571256
Chromosome Location chr15:40234746-40234747
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:40227200-40235800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr15:40227200-40236000 Weak transcription Brain Angular Gyrus brain
3 chr15:40227200-40247800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:40227200-40248200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr15:40227200-40268400 Weak transcription Esophagus oesophagus
6 chr15:40227400-40235000 Weak transcription Fetal Brain Female brain
7 chr15:40227400-40236000 Weak transcription Brain Germinal Matrix brain
8 chr15:40227400-40236800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr15:40227400-40237600 Weak transcription Fetal Brain Male brain
10 chr15:40227400-40283400 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr15:40227600-40235800 Weak transcription Small Intestine intestine
12 chr15:40227800-40235000 Weak transcription Right Ventricle heart
13 chr15:40227800-40237600 Weak transcription Gastric stomach
14 chr15:40227800-40247000 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr15:40227800-40268400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr15:40228000-40235000 Weak transcription Fetal Intestine Small intestine
17 chr15:40228000-40238400 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr15:40228200-40235000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr15:40228200-40323800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr15:40228600-40239800 Weak transcription Stomach Mucosa stomach
21 chr15:40228600-40246000 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr15:40229400-40235400 Genic enhancers Muscle Satellite Cultured Cells --
23 chr15:40230000-40235200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr15:40230000-40235200 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr15:40230000-40263000 Strong transcription Fetal Muscle Trunk muscle
26 chr15:40230200-40255600 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr15:40230400-40240000 Strong transcription Rectal Mucosa Donor 31 rectum
28 chr15:40230400-40261600 Strong transcription Breast Myoepithelial Primary Cells Breast
29 chr15:40230600-40235200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr15:40230600-40237400 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr15:40230600-40252400 Weak transcription Right Atrium heart
32 chr15:40230800-40239600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr15:40230800-40240000 Strong transcription Fetal Stomach stomach
34 chr15:40231000-40237600 Weak transcription Spleen Spleen
35 chr15:40231000-40268400 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr15:40231400-40235200 Genic enhancers Osteobl bone
37 chr15:40231400-40235600 Weak transcription Ovary ovary
38 chr15:40231400-40243400 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr15:40231600-40235400 Genic enhancers NHLF lung
40 chr15:40231800-40234800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr15:40231800-40238800 Strong transcription Primary T cells fromperipheralblood blood
42 chr15:40231800-40239000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr15:40231800-40240200 Strong transcription Fetal Muscle Leg muscle
44 chr15:40231800-40243400 Strong transcription H1 Cell Line embryonic stem cell
45 chr15:40231800-40252600 Strong transcription iPS-20b Cell Line embryonic stem cell
46 chr15:40232000-40235400 Strong transcription Dnd41 blood
47 chr15:40232000-40240000 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr15:40232000-40240400 Strong transcription Primary B cells from cord blood blood
49 chr15:40232000-40261400 Strong transcription Skeletal Muscle Female skeletal muscle
50 chr15:40232000-40262600 Strong transcription Liver Liver

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Last update: Aug 31, 2015