Variant report

Variant rs57163857
Chromosome Location chr1:180170241-180170242
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:180138200-180172800 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr1:180143400-180171600 Strong transcription Fetal Stomach stomach
3 chr1:180150200-180171200 Strong transcription NHLF lung
4 chr1:180157400-180170600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:180157600-180171000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:180159200-180182800 Weak transcription HSMMtube muscle
7 chr1:180160000-180179200 Weak transcription HMEC breast
8 chr1:180160200-180171400 Weak transcription NH-A brain
9 chr1:180160200-180176800 Weak transcription Primary hematopoietic stem cells blood
10 chr1:180164000-180173200 Weak transcription K562 blood
11 chr1:180164200-180170800 Weak transcription NHDF-Ad bronchial
12 chr1:180164800-180187800 Weak transcription Right Atrium heart
13 chr1:180165000-180177200 Weak transcription Fetal Thymus thymus
14 chr1:180165800-180171000 Weak transcription iPS-20b Cell Line embryonic stem cell
15 chr1:180166000-180171000 Weak transcription Fetal Lung lung
16 chr1:180166000-180171400 Weak transcription Brain Anterior Caudate brain
17 chr1:180166000-180173200 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr1:180166000-180173400 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:180166000-180173400 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr1:180166000-180175400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:180166200-180170600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:180166600-180182800 Weak transcription Brain Substantia Nigra brain
23 chr1:180166800-180172200 Weak transcription Thymus Thymus
24 chr1:180167000-180172000 Weak transcription Rectal Smooth Muscle rectum
25 chr1:180167200-180179200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr1:180167400-180171800 Weak transcription Left Ventricle heart
27 chr1:180167400-180173200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:180167800-180173200 Weak transcription Right Ventricle heart
29 chr1:180167800-180176600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:180167800-180177000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:180167800-180177600 Weak transcription Colon Smooth Muscle Colon
32 chr1:180167800-180179200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr1:180167800-180179400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:180168000-180170800 Strong transcription Spleen Spleen
35 chr1:180168000-180171400 Weak transcription Placenta Amnion Placenta Amnion
36 chr1:180168200-180170400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr1:180168200-180172600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr1:180168200-180176800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:180168200-180177200 Weak transcription Pancreas Pancrea
40 chr1:180168200-180179200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:180168400-180170800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:180168400-180171000 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:180168400-180171000 Weak transcription Gastric stomach
44 chr1:180168400-180172800 Weak transcription Ovary ovary
45 chr1:180168400-180173600 Weak transcription Fetal Intestine Small intestine
46 chr1:180168400-180173600 Weak transcription Stomach Smooth Muscle stomach
47 chr1:180168400-180177200 Weak transcription Placenta Placenta
48 chr1:180168400-180180800 Weak transcription Esophagus oesophagus
49 chr1:180168600-180170400 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr1:180168600-180171800 Weak transcription Aorta Aorta

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