Variant report

Variant	rs571717169
Chromosome Location	chr11:35103914-35103915
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:35097231..35099674-chr11:35101240..35103980,3	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045837	chr11:34893992-35395190	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
2	nsv430371	chr11:34975067-35111292	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
3	nsv540999	chr11:35021936-35185471	Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
4	esv2758263	chr11:35029933-35226784	Genic enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
5	esv2759818	chr11:35029933-35238578	Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
6	nsv541000	chr11:35053717-35185471	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
7	nsv541001	chr11:35053717-35224624	Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
8	esv2757437	chr11:35067482-35238578	Weak transcription Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
9	esv2752912	chr11:35074167-35238578	Weak transcription Flanking Active TSS Active TSS Strong transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
10	nsv508623	chr11:35094933-35203363	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
11	nsv541002	chr11:35101282-35224624	Weak transcription Flanking Active TSS Genic enhancers Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
12	nsv975326	chr11:35103908-35125981	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:87 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:35097600-35106400	Enhancers	Primary B cells from peripheral blood	blood
2	chr11:35097800-35106600	Enhancers	Fetal Thymus	thymus
3	chr11:35098800-35104000	Weak transcription	Psoas Muscle	Psoas
4	chr11:35098800-35104000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr11:35098800-35104000	Weak transcription	Stomach Smooth Muscle	stomach
6	chr11:35098800-35105400	Weak transcription	Small Intestine	intestine
7	chr11:35099400-35104400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr11:35099600-35104000	Enhancers	Primary T killer memory cells from peripheral blood	blood
9	chr11:35099800-35104000	Weak transcription	Stomach Mucosa	stomach
10	chr11:35099800-35104200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr11:35100200-35104000	Enhancers	Primary B cells from cord blood	blood
12	chr11:35102400-35104000	Weak transcription	Thymus	Thymus
13	chr11:35103000-35104000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr11:35103200-35104000	Enhancers	NHLF	lung
15	chr11:35103200-35104400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr11:35103200-35104800	Enhancers	NHDF-Ad	bronchial
17	chr11:35103200-35106600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr11:35103200-35106800	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr11:35103200-35107800	Enhancers	Adipose Nuclei	Adipose
20	chr11:35103200-35110600	Enhancers	Fetal Muscle Leg	muscle
21	chr11:35103400-35104400	Enhancers	HUVEC	blood vessel
22	chr11:35103400-35104800	Enhancers	Spleen	Spleen
23	chr11:35103400-35105400	Enhancers	Pancreas	Pancrea
24	chr11:35103400-35106600	Enhancers	Primary hematopoietic stem cells short term culture	blood
25	chr11:35103600-35105400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr11:35103600-35105600	Enhancers	Placenta	Placenta
27	chr11:35103600-35106800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr11:35103600-35108400	Enhancers	Fetal Muscle Trunk	muscle
29	chr11:35103800-35104000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr11:35103800-35104000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr11:35103800-35104000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr11:35103800-35104000	Active TSS	Colonic Mucosa	Colon
33	chr11:35103800-35104000	Flanking Active TSS	A549	lung
34	chr11:35103800-35104000	Enhancers	HSMM	muscle
35	chr11:35103800-35104200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr11:35103800-35104200	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
37	chr11:35103800-35104200	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
38	chr11:35103800-35104200	Enhancers	Gastric	stomach
39	chr11:35103800-35104200	Enhancers	Rectal Mucosa Donor 31	rectum
40	chr11:35103800-35104200	Enhancers	Rectal Smooth Muscle	rectum
41	chr11:35103800-35104200	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
42	chr11:35103800-35104200	Flanking Active TSS	NH-A	brain
43	chr11:35103800-35104400	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr11:35103800-35104600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr11:35103800-35104600	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
46	chr11:35103800-35104600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
47	chr11:35103800-35104600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
48	chr11:35103800-35104600	Enhancers	HSMMtube	muscle
49	chr11:35103800-35104800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr11:35103800-35104800	Enhancers	Right Atrium	heart

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