Variant report

Variant	rs57235740
Chromosome Location	chr10:117662718-117662719
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10490984	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197469	1.00[ASN][1000 genomes]
rs11197470	1.00[ASN][1000 genomes]
rs11197471	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197472	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12243113	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12244318	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12259143	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12259200	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17093765	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17093794	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17095693	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17095696	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2615876	1.00[ASN][1000 genomes]
rs2620962	1.00[ASN][1000 genomes]
rs4336952	0.80[AFR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59851778	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6585375	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7070558	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7076697	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7077116	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7083759	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7086294	1.00[ASN][1000 genomes]
rs7087717	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7098728	1.00[ASN][1000 genomes]
rs7100539	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71472879	1.00[ASN][1000 genomes]
rs73365756	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73381663	1.00[ASN][1000 genomes]
rs7897649	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7898613	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7899322	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7902099	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7904803	1.00[ASN][1000 genomes]
rs7905925	1.00[ASN][1000 genomes]
rs7915450	0.83[ASN][1000 genomes]
rs7917409	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117657000-117677800	Weak transcription	HSMM	muscle
2	chr10:117658200-117677600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:117658200-117695400	Weak transcription	Aorta	Aorta
4	chr10:117662000-117663200	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr10:117662000-117672800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr10:117662200-117663000	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr10:117662400-117662800	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr10:117662400-117669600	Weak transcription	H9 Cell Line	embryonic stem cell
9	chr10:117662400-117670200	Weak transcription	Ovary	ovary

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