Variant report

Variant rs572574
Chromosome Location chr11:67778488-67778489
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67771600-67797600 Weak transcription Small Intestine intestine
2 chr11:67772200-67779200 Enhancers Primary B cells from peripheral blood blood
3 chr11:67772600-67792400 Weak transcription H9 Cell Line embryonic stem cell
4 chr11:67775000-67782400 Enhancers Cortex derived primary cultured neurospheres brain
5 chr11:67775600-67779400 Enhancers Fetal Heart heart
6 chr11:67776000-67778800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr11:67776000-67778800 Enhancers NHEK skin
8 chr11:67776400-67778600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr11:67776400-67779400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr11:67776800-67780200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr11:67777000-67778800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr11:67777200-67778600 Enhancers H1 Cell Line embryonic stem cell
13 chr11:67777200-67778600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr11:67777200-67778800 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr11:67777200-67778800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
16 chr11:67777200-67779000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr11:67777200-67779000 Enhancers Fetal Stomach stomach
18 chr11:67777400-67778600 Enhancers HUES6 Cell Line embryonic stem cell
19 chr11:67777400-67778600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
20 chr11:67777400-67778600 Active TSS Primary mononuclear cells fromperipheralblood Blood
21 chr11:67777400-67778600 Flanking Active TSS Placenta Placenta
22 chr11:67777400-67778600 Active TSS A549 lung
23 chr11:67777400-67778800 Enhancers HUES48 Cell Line embryonic stem cell
24 chr11:67777400-67778800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
25 chr11:67777400-67778800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
26 chr11:67777400-67778800 Flanking Active TSS Fetal Intestine Large intestine
27 chr11:67777400-67778800 Flanking Active TSS Fetal Intestine Small intestine
28 chr11:67777400-67778800 Flanking Active TSS HMEC breast
29 chr11:67777400-67779000 Enhancers ES-WA7 Cell Line embryonic stem cell
30 chr11:67777400-67779000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
31 chr11:67777400-67779000 Flanking Active TSS Stomach Smooth Muscle stomach
32 chr11:67777400-67779400 Flanking Active TSS Osteobl bone
33 chr11:67777400-67780400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
34 chr11:67777400-67782600 Flanking Active TSS Muscle Satellite Cultured Cells --
35 chr11:67777600-67778600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr11:67777600-67778600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr11:67777600-67778600 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr11:67777600-67778600 Flanking Active TSS Primary B cells from cord blood blood
39 chr11:67777600-67778600 Flanking Active TSS Brain Cingulate Gyrus brain
40 chr11:67777600-67778600 Flanking Active TSS Brain Hippocampus Middle brain
41 chr11:67777600-67778600 Flanking Active TSS Fetal Muscle Trunk muscle
42 chr11:67777600-67778600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr11:67777600-67778800 Enhancers HUES64 Cell Line embryonic stem cell
44 chr11:67777600-67778800 Flanking Active TSS Adipose Nuclei Adipose
45 chr11:67777600-67778800 Flanking Active TSS Brain Anterior Caudate brain
46 chr11:67777600-67778800 Flanking Active TSS Rectal Smooth Muscle rectum
47 chr11:67777600-67779000 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr11:67777600-67779000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
49 chr11:67777600-67779000 Flanking Active TSS Brain Substantia Nigra brain
50 chr11:67777600-67779000 Flanking Active TSS Duodenum Mucosa Duodenum

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