Variant report

Variant	rs573074630
Chromosome Location	chr7:61079401-61079402
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:25 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3341268	chr7:61055474-61785676	ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv428166	chr7:61056610-61276601	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	n/a	n/a	inside rSNPs	diseases
3	nsv436562	chr7:61063348-61761904	Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv1029547	chr7:61063962-61288808	ZNF genes & repeats Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases
5	nsv1018596	chr7:61063962-61760691	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv1024753	chr7:61063962-61779286	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
7	nsv1031202	chr7:61063962-61814080	Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Strong transcription Flanking Active TSS Enhancers Bivalent/Poised TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv1024632	chr7:61063962-61836567	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
9	nsv1034739	chr7:61063962-61846655	ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
10	nsv1027387	chr7:61063962-61888128	ZNF genes & repeats Weak transcription Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
11	nsv1021413	chr7:61063962-61987338	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
12	nsv1023301	chr7:61063962-62049599	Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
13	nsv1028986	chr7:61063962-62059428	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
14	nsv607113	chr7:61065279-61110576	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
15	nsv888080	chr7:61070271-61202279	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
16	nsv1021890	chr7:61072037-61779286	ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
17	nsv523744	chr7:61072037-61852895	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
18	nsv888081	chr7:61074140-61209425	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
19	nsv888082	chr7:61074194-61138655	Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS	n/a	n/a	inside rSNPs	diseases
20	nsv607114	chr7:61074194-61244229	ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
21	nsv888083	chr7:61077934-61138655	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
22	nsv888084	chr7:61077934-61163004	ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Active TSS Enhancers	n/a	n/a	inside rSNPs	diseases
23	nsv888085	chr7:61077934-61736882	ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
24	nsv888086	chr7:61077934-61913330	ZNF genes & repeats Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Strong transcription Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
25	esv9091	chr7:61079383-61085316	Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:96 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:61078800-61086000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
2	chr7:61079000-61079600	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
3	chr7:61079000-61079600	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
4	chr7:61079000-61079600	Flanking Bivalent TSS/Enh	Primary T killer memory cells from peripheral blood	blood
5	chr7:61079000-61079600	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
6	chr7:61079000-61079600	ZNF genes & repeats	Fetal Thymus	thymus
7	chr7:61079000-61079600	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
8	chr7:61079000-61079800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
9	chr7:61079000-61079800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr7:61079000-61079800	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr7:61079000-61079800	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
12	chr7:61079000-61079800	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr7:61079000-61079800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr7:61079000-61079800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr7:61079000-61079800	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr7:61079000-61079800	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr7:61079000-61079800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells	blood
18	chr7:61079000-61079800	Flanking Bivalent TSS/Enh	Primary T helper memory cells from peripheral blood 2	blood
19	chr7:61079000-61079800	Flanking Bivalent TSS/Enh	Primary T helper naive cells from peripheral blood	blood
20	chr7:61079000-61079800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
21	chr7:61079000-61079800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
22	chr7:61079000-61079800	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
23	chr7:61079000-61079800	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
24	chr7:61079000-61079800	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
25	chr7:61079000-61079800	Flanking Bivalent TSS/Enh	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr7:61079000-61079800	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
27	chr7:61079000-61079800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
28	chr7:61079000-61079800	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
29	chr7:61079000-61079800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
30	chr7:61079000-61079800	ZNF genes & repeats	Adipose Nuclei	Adipose
31	chr7:61079000-61079800	Flanking Active TSS	Aorta	Aorta
32	chr7:61079000-61079800	ZNF genes & repeats	Liver	Liver
33	chr7:61079000-61079800	ZNF genes & repeats	Brain Angular Gyrus	brain
34	chr7:61079000-61079800	ZNF genes & repeats	Brain Anterior Caudate	brain
35	chr7:61079000-61079800	ZNF genes & repeats	Brain Cingulate Gyrus	brain
36	chr7:61079000-61079800	ZNF genes & repeats	Brain Hippocampus Middle	brain
37	chr7:61079000-61079800	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
38	chr7:61079000-61079800	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
39	chr7:61079000-61079800	ZNF genes & repeats	Brain Substantia Nigra	brain
40	chr7:61079000-61079800	ZNF genes & repeats	Colon Smooth Muscle	Colon
41	chr7:61079000-61079800	ZNF genes & repeats	Duodenum Mucosa	Duodenum
42	chr7:61079000-61079800	ZNF genes & repeats	Fetal Brain Male	brain
43	chr7:61079000-61079800	ZNF genes & repeats	Fetal Heart	heart
44	chr7:61079000-61079800	ZNF genes & repeats	Fetal Kidney	kidney
45	chr7:61079000-61079800	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
46	chr7:61079000-61079800	ZNF genes & repeats	Fetal Lung	lung
47	chr7:61079000-61079800	ZNF genes & repeats	Placenta	Placenta
48	chr7:61079000-61079800	Flanking Bivalent TSS/Enh	Gastric	stomach
49	chr7:61079000-61079800	ZNF genes & repeats	Left Ventricle	heart
50	chr7:61079000-61079800	ZNF genes & repeats	Ovary	ovary

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