The 2.0 version of rSNPBase

Variant report

Variant rs57312986
Chromosome Location chr12:11935176-11935177
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11915400-11938000 Weak transcription NHEK skin
2 chr12:11915600-11938000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr12:11918000-11936000 Weak transcription H9 Cell Line embryonic stem cell
4 chr12:11919600-11936200 Weak transcription H1 Cell Line embryonic stem cell
5 chr12:11919600-11936800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr12:11920000-11937800 Weak transcription NHLF lung
7 chr12:11921800-11946600 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr12:11922000-11948200 Weak transcription Colonic Mucosa Colon
9 chr12:11923600-11952000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr12:11925800-11938000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr12:11925800-11938000 Weak transcription HMEC breast
12 chr12:11926600-11936200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr12:11927000-11936000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr12:11927400-11937400 Genic enhancers Primary hematopoietic stem cells short term culture blood
15 chr12:11927400-11941400 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr12:11927800-11946200 Weak transcription Gastric stomach
17 chr12:11928000-11946400 Weak transcription Fetal Intestine Large intestine
18 chr12:11928200-11936800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr12:11928200-11938200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr12:11929000-11938200 Weak transcription Brain Cingulate Gyrus brain
21 chr12:11929800-11935200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr12:11929800-11946200 Weak transcription HUVEC blood vessel
23 chr12:11929800-11948600 Weak transcription Primary B cells from cord blood blood
24 chr12:11930000-11943200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr12:11930800-11938600 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr12:11931200-11943800 Weak transcription Ovary ovary
27 chr12:11931200-11951600 Weak transcription Primary T cells from cord blood blood
28 chr12:11931400-11936800 Weak transcription Fetal Intestine Small intestine
29 chr12:11931400-11937000 Weak transcription Fetal Muscle Trunk muscle
30 chr12:11931400-11940800 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr12:11931400-11946200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr12:11931400-11951200 Weak transcription Primary T cells fromperipheralblood blood
33 chr12:11931400-11951800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr12:11931600-11946200 Weak transcription Lung lung
35 chr12:11931600-11947200 Weak transcription Duodenum Mucosa Duodenum
36 chr12:11931600-11950200 Weak transcription Esophagus oesophagus
37 chr12:11931800-11938400 Weak transcription Primary monocytes fromperipheralblood blood
38 chr12:11931800-11946400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr12:11932000-11937000 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr12:11932200-11937200 Weak transcription Left Ventricle heart
41 chr12:11932200-11938400 Weak transcription Brain Hippocampus Middle brain
42 chr12:11932200-11940400 Weak transcription Small Intestine intestine
43 chr12:11932400-11938200 Weak transcription Brain Substantia Nigra brain
44 chr12:11932400-11938600 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr12:11932400-11938600 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr12:11932400-11946200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr12:11932600-11938000 Weak transcription Brain Anterior Caudate brain
48 chr12:11932600-11938000 Weak transcription HSMMtube muscle
49 chr12:11932600-11946600 Weak transcription Placenta Amnion Placenta Amnion
50 chr12:11932800-11938400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015