The 2.0 version of rSNPBase

Variant report

Variant rs57315995
Chromosome Location chr5:75758644-75758645
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:75722800-75767800 Weak transcription Ovary ovary
2 chr5:75745000-75767800 Weak transcription Fetal Thymus thymus
3 chr5:75747200-75771600 Weak transcription Fetal Stomach stomach
4 chr5:75747400-75767800 Weak transcription Spleen Spleen
5 chr5:75747800-75767800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr5:75753000-75759400 Enhancers Stomach Mucosa stomach
7 chr5:75753800-75765800 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr5:75754000-75759400 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr5:75754200-75760600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:75754200-75772000 Weak transcription Fetal Kidney kidney
11 chr5:75754400-75765400 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr5:75754400-75768000 Weak transcription Fetal Lung lung
13 chr5:75754600-75764400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr5:75754600-75765800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr5:75754800-75761200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr5:75755000-75765400 Weak transcription Placenta Placenta
17 chr5:75755000-75766600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr5:75756400-75766000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr5:75757200-75758800 Enhancers Colonic Mucosa Colon
20 chr5:75757200-75759000 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr5:75757200-75759400 Strong transcription Primary T cells fromperipheralblood blood
22 chr5:75757200-75759400 Strong transcription HepG2 liver
23 chr5:75757200-75760000 Strong transcription Primary T cells from cord blood blood
24 chr5:75757200-75760600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:75757200-75761200 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr5:75757400-75758800 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr5:75757400-75759000 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr5:75757400-75759000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr5:75757400-75759200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
30 chr5:75757400-75759400 Enhancers Rectal Mucosa Donor 31 rectum
31 chr5:75757400-75759600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr5:75757400-75759800 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr5:75757400-75760000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:75757400-75762600 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr5:75757400-75762800 Strong transcription Primary hematopoietic stem cells blood
36 chr5:75757400-75763400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr5:75757800-75759400 Enhancers Duodenum Mucosa Duodenum
38 chr5:75757800-75762600 Strong transcription Primary monocytes fromperipheralblood blood
39 chr5:75757800-75767800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr5:75758000-75759000 Enhancers Fetal Intestine Large intestine
41 chr5:75758000-75759200 Enhancers Fetal Intestine Small intestine
42 chr5:75758000-75759400 Enhancers Rectal Mucosa Donor 29 rectum
43 chr5:75758000-75767200 Weak transcription Small Intestine intestine
44 chr5:75758000-75767800 Weak transcription Gastric stomach
45 chr5:75758000-75767800 Weak transcription Lung lung
46 chr5:75758000-75769400 Weak transcription H9 Cell Line embryonic stem cell
47 chr5:75758200-75767800 Weak transcription Pancreas Pancrea
48 chr5:75758200-75775000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr5:75758400-75765400 Weak transcription Primary T helper naive cells from peripheral blood blood
50 chr5:75758400-75765800 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015