Variant report

Variant rs57333661
Chromosome Location chr4:99541944-99541945
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99523000-99545000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr4:99529600-99542400 Enhancers Brain Cingulate Gyrus brain
3 chr4:99529600-99543200 Enhancers Cortex derived primary cultured neurospheres brain
4 chr4:99531000-99544200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr4:99532600-99545400 Weak transcription HMEC breast
6 chr4:99534400-99543200 Weak transcription Thymus Thymus
7 chr4:99535400-99544200 Weak transcription NHEK skin
8 chr4:99535600-99554200 Enhancers Brain Substantia Nigra brain
9 chr4:99536200-99545800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr4:99536800-99542400 Enhancers Brain Angular Gyrus brain
11 chr4:99537600-99544800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr4:99538000-99542200 Enhancers Fetal Brain Male brain
13 chr4:99538200-99542600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr4:99538400-99542000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr4:99538400-99542200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
16 chr4:99538400-99543800 Enhancers Brain Anterior Caudate brain
17 chr4:99539000-99546400 Weak transcription Fetal Thymus thymus
18 chr4:99539000-99547200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr4:99539200-99543400 Weak transcription NHDF-Ad bronchial
20 chr4:99539200-99544200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr4:99539200-99544200 Weak transcription Osteobl bone
22 chr4:99539200-99545400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr4:99539200-99546000 Weak transcription Fetal Heart heart
24 chr4:99539200-99546600 Weak transcription HSMM muscle
25 chr4:99539200-99547200 Weak transcription Rectal Smooth Muscle rectum
26 chr4:99539200-99547200 Weak transcription Right Atrium heart
27 chr4:99539200-99547600 Weak transcription Gastric stomach
28 chr4:99539200-99547600 Weak transcription Left Ventricle heart
29 chr4:99539200-99547600 Weak transcription Right Ventricle heart
30 chr4:99539200-99547800 Weak transcription Fetal Stomach stomach
31 chr4:99539800-99542400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr4:99539800-99542400 Enhancers Brain Germinal Matrix brain
33 chr4:99540000-99542000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr4:99540000-99547400 Weak transcription Fetal Lung lung
35 chr4:99540400-99542600 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr4:99540400-99543600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr4:99540600-99542000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr4:99540600-99542200 Enhancers Primary T helper cells fromperipheralblood blood
39 chr4:99540800-99542200 Enhancers Brain Hippocampus Middle brain
40 chr4:99541000-99542000 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr4:99541000-99542000 Enhancers Primary T cells fromperipheralblood blood
42 chr4:99541000-99542200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr4:99541000-99542400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr4:99541000-99543200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr4:99541000-99544000 Weak transcription Muscle Satellite Cultured Cells --
46 chr4:99541200-99542000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr4:99541200-99542000 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr4:99541200-99542000 Enhancers Primary hematopoietic stem cells short term culture blood
49 chr4:99541200-99542000 Enhancers Primary T killer naive cells fromperipheralblood blood
50 chr4:99541200-99542000 Enhancers NH-A brain

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