Variant report

Variant rs57373619
Chromosome Location chr3:42743751-42743752
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:42739200-42751800 Weak transcription Pancreas Pancrea
2 chr3:42740800-42744200 Active TSS Left Ventricle heart
3 chr3:42741200-42744400 Active TSS Right Ventricle heart
4 chr3:42742000-42744200 Flanking Active TSS Brain Substantia Nigra brain
5 chr3:42742000-42744200 Active TSS Right Atrium heart
6 chr3:42742000-42744800 Flanking Active TSS Brain Hippocampus Middle brain
7 chr3:42742000-42745000 Flanking Active TSS Brain Inferior Temporal Lobe brain
8 chr3:42742200-42744200 Flanking Active TSS Brain Anterior Caudate brain
9 chr3:42742400-42744200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
10 chr3:42742400-42744800 Flanking Active TSS Brain Cingulate Gyrus brain
11 chr3:42742600-42743800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr3:42742600-42744000 Enhancers ES-I3 Cell Line embryonic stem cell
13 chr3:42742600-42744000 Enhancers Cortex derived primary cultured neurospheres brain
14 chr3:42742800-42745000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:42743000-42744800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
16 chr3:42743000-42745000 Enhancers ES-WA7 Cell Line embryonic stem cell
17 chr3:42743000-42746000 Weak transcription Spleen Spleen
18 chr3:42743200-42744000 Flanking Active TSS Fetal Heart heart
19 chr3:42743200-42744200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
20 chr3:42743200-42744200 Flanking Active TSS Fetal Muscle Leg muscle
21 chr3:42743200-42744400 Active TSS Pancreatic Islets Pancreatic Islet
22 chr3:42743400-42743800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr3:42743400-42743800 Flanking Active TSS Brain Angular Gyrus brain
24 chr3:42743400-42744200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr3:42743400-42744400 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr3:42743400-42744400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr3:42743400-42744800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
28 chr3:42743600-42744000 Enhancers Placenta Placenta
29 chr3:42743600-42744000 Active TSS Psoas Muscle Psoas
30 chr3:42743600-42744000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
31 chr3:42743600-42744400 Active TSS Skeletal Muscle Female skeletal muscle

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