The 2.0 version of rSNPBase

Variant report

Variant rs57383190
Chromosome Location chr3:87012595-87012596
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:86986800-87014400 Weak transcription Aorta Aorta
2 chr3:86988200-87013400 Weak transcription Ovary ovary
3 chr3:86993800-87014200 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr3:86994000-87013200 Weak transcription Fetal Muscle Trunk muscle
5 chr3:86997600-87013200 Genic enhancers NHDF-Ad bronchial
6 chr3:86998000-87019800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr3:86998800-87036000 Weak transcription Psoas Muscle Psoas
8 chr3:87003800-87014200 Weak transcription Fetal Muscle Leg muscle
9 chr3:87004200-87014400 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr3:87004400-87014200 Weak transcription Adipose Nuclei Adipose
11 chr3:87007000-87013400 Genic enhancers Osteobl bone
12 chr3:87007200-87026600 Weak transcription Esophagus oesophagus
13 chr3:87007200-87038400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr3:87008000-87016200 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr3:87008000-87016600 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr3:87008000-87022600 Weak transcription HMEC breast
17 chr3:87008000-87028800 Weak transcription H1 Cell Line embryonic stem cell
18 chr3:87008000-87032000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr3:87008000-87034200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr3:87008200-87014600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr3:87008200-87016200 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr3:87008200-87022600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr3:87008600-87014200 Weak transcription Colon Smooth Muscle Colon
24 chr3:87009800-87016400 Weak transcription Placenta Amnion Placenta Amnion
25 chr3:87010800-87016800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr3:87010800-87020000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr3:87011000-87013200 Weak transcription Fetal Lung lung
28 chr3:87011000-87014600 Weak transcription Fetal Intestine Small intestine
29 chr3:87011000-87016200 Weak transcription A549 lung
30 chr3:87011400-87012800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr3:87011400-87013000 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr3:87011400-87015600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr3:87011400-87015800 Strong transcription Muscle Satellite Cultured Cells --
34 chr3:87011600-87012600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:87011600-87012600 Enhancers Hela-S3 cervix
36 chr3:87011600-87012800 Weak transcription NH-A brain
37 chr3:87011600-87013000 Weak transcription NHLF lung
38 chr3:87011600-87014000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr3:87011600-87014400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr3:87011600-87014600 Weak transcription Fetal Intestine Large intestine
41 chr3:87011600-87016600 Strong transcription HSMM muscle
42 chr3:87011600-87017800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr3:87011600-87022600 Weak transcription HUVEC blood vessel
44 chr3:87011600-87026600 Weak transcription Rectal Smooth Muscle rectum
45 chr3:87012000-87012800 Weak transcription Placenta Placenta
46 chr3:87012000-87013000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:87012200-87012600 Weak transcription HSMMtube muscle
48 chr3:87012400-87017600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr3:87012400-87018000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015