Variant report

Variant rs57389460
Chromosome Location chr1:76254523-76254524
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76250400-76254800 Flanking Active TSS Primary B cells from cord blood blood
2 chr1:76251000-76255200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr1:76251000-76255400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:76251200-76254600 Active TSS H9 Cell Line embryonic stem cell
5 chr1:76251200-76254600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:76251200-76254600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
7 chr1:76251200-76254600 Active TSS A549 lung
8 chr1:76251200-76255000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:76251200-76255000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:76251200-76255400 Active TSS Right Atrium heart
11 chr1:76251200-76256200 Active TSS Right Ventricle heart
12 chr1:76251400-76254800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr1:76251600-76254800 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:76251600-76254800 Active TSS NHLF lung
15 chr1:76252200-76258400 Weak transcription Spleen Spleen
16 chr1:76252400-76254600 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:76252400-76255200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
18 chr1:76252400-76258800 Transcr. at gene 5' and 3' K562 blood
19 chr1:76252600-76254800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr1:76252600-76257600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:76252800-76254800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
22 chr1:76252800-76254800 Flanking Active TSS Liver Liver
23 chr1:76252800-76255000 Transcr. at gene 5' and 3' Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:76252800-76255200 Flanking Active TSS Brain Anterior Caudate brain
25 chr1:76252800-76256000 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
26 chr1:76252800-76256800 Transcr. at gene 5' and 3' Dnd41 blood
27 chr1:76252800-76257000 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
28 chr1:76252800-76257000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
29 chr1:76252800-76257200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
30 chr1:76253000-76255200 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
31 chr1:76253000-76255200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
32 chr1:76253000-76255400 Transcr. at gene 5' and 3' HSMM muscle
33 chr1:76253000-76255600 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:76253000-76255800 Transcr. at gene 5' and 3' HMEC breast
35 chr1:76253000-76256000 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
36 chr1:76253000-76256800 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
37 chr1:76253000-76257400 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
38 chr1:76253200-76255200 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:76253200-76255200 Enhancers Primary neutrophils fromperipheralblood blood
40 chr1:76253200-76255200 Enhancers Placenta Amnion Placenta Amnion
41 chr1:76253200-76255200 Transcr. at gene 5' and 3' Osteobl bone
42 chr1:76253200-76256000 Transcr. at gene 5' and 3' NH-A brain
43 chr1:76253200-76256600 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:76253200-76256600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:76253200-76257400 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:76253400-76254800 Transcr. at gene 5' and 3' Fetal Intestine Large intestine
47 chr1:76253400-76255000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
48 chr1:76253400-76255000 Active TSS HepG2 liver
49 chr1:76253400-76255000 Flanking Active TSS HUVEC blood vessel
50 chr1:76253400-76255400 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived

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