The 2.0 version of rSNPBase

Variant report

Variant rs57405296
Chromosome Location chr3:177402301-177402302
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:13 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:177392000-177405400 Weak transcription Brain Substantia Nigra brain
2 chr3:177392200-177404400 Weak transcription Ovary ovary
3 chr3:177392400-177418800 Weak transcription Stomach Smooth Muscle stomach
4 chr3:177394800-177404800 Weak transcription H9 Cell Line embryonic stem cell
5 chr3:177395000-177406000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr3:177395000-177411600 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr3:177398800-177405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr3:177398800-177421600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr3:177400400-177406200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr3:177401000-177402800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr3:177401800-177403000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr3:177401800-177403000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:177401800-177404400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015