Variant report

Variant rs574585788
Chromosome Location chr5:180252160-180252161
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180238800-180253200 Weak transcription A549 lung
2 chr5:180244400-180252800 Weak transcription NHLF lung
3 chr5:180244600-180256800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
4 chr5:180244600-180256800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:180245000-180256800 Weak transcription Spleen Spleen
6 chr5:180245400-180252800 Weak transcription Liver Liver
7 chr5:180245800-180252200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:180246200-180252600 Weak transcription Colonic Mucosa Colon
9 chr5:180246200-180252600 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr5:180247600-180253000 Weak transcription Fetal Intestine Large intestine
11 chr5:180248000-180252200 Weak transcription Placenta Placenta
12 chr5:180248000-180256600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr5:180248200-180252800 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr5:180248200-180256600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:180248600-180256000 Weak transcription Primary B cells from cord blood blood
16 chr5:180248600-180256000 Weak transcription Primary hematopoietic stem cells blood
17 chr5:180248800-180256200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr5:180248800-180256800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr5:180249000-180256400 Weak transcription Primary B cells from peripheral blood blood
20 chr5:180249000-180257600 Weak transcription Ovary ovary
21 chr5:180249200-180256600 Weak transcription GM12878-XiMat blood
22 chr5:180249600-180252600 Weak transcription Monocytes-CD14+_RO01746 blood
23 chr5:180249800-180252600 Weak transcription Primary monocytes fromperipheralblood blood
24 chr5:180250400-180252800 Enhancers Fetal Thymus thymus
25 chr5:180250400-180253400 Enhancers Right Atrium heart
26 chr5:180250400-180253400 Enhancers Skeletal Muscle Male skeletal muscle
27 chr5:180250400-180253600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
28 chr5:180250400-180253600 Enhancers Fetal Muscle Leg muscle
29 chr5:180250400-180253800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr5:180250400-180253800 Enhancers Adipose Nuclei Adipose
31 chr5:180250400-180253800 Enhancers Skeletal Muscle Female skeletal muscle
32 chr5:180250400-180254400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr5:180250400-180254600 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr5:180250600-180252200 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr5:180250600-180252400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr5:180250600-180252600 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr5:180250600-180253600 Enhancers Rectal Mucosa Donor 31 rectum
38 chr5:180250600-180254200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr5:180250600-180254200 Enhancers HSMMtube muscle
40 chr5:180250800-180252200 Weak transcription Esophagus oesophagus
41 chr5:180250800-180252200 Weak transcription Fetal Muscle Trunk muscle
42 chr5:180250800-180252200 Weak transcription Psoas Muscle Psoas
43 chr5:180250800-180252200 Weak transcription Right Ventricle heart
44 chr5:180250800-180252600 Weak transcription Lung lung
45 chr5:180250800-180253800 Enhancers NHDF-Ad bronchial
46 chr5:180250800-180256600 Weak transcription K562 blood
47 chr5:180251000-180253200 Enhancers Primary T cells from cord blood blood
48 chr5:180251000-180253400 Enhancers HSMM muscle
49 chr5:180251000-180253600 Enhancers Colon Smooth Muscle Colon
50 chr5:180251200-180253200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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