Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:30884994..30887609-chr22:30891940..30894368,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10428025	0.90[ASN][1000 genomes]
rs12165697	1.00[MEX][hapmap]
rs12165816	1.00[MEX][hapmap]
rs12166447	0.90[ASN][1000 genomes]
rs12167903	1.00[MEX][hapmap]
rs12168516	1.00[MEX][hapmap]
rs12168728	1.00[MEX][hapmap]
rs12170920	0.90[ASN][1000 genomes]
rs42929	1.00[MEX][hapmap]
rs5749109	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs5749115	0.90[ASN][1000 genomes]
rs5749117	0.90[ASN][1000 genomes]
rs5753178	0.90[ASN][1000 genomes]
rs5753180	0.90[ASN][1000 genomes]
rs5753181	0.90[ASN][1000 genomes]
rs5753183	0.90[ASN][1000 genomes]
rs62226963	0.90[ASN][1000 genomes]
rs6518696	0.86[ASN][1000 genomes]
rs6518697	0.86[ASN][1000 genomes]
rs7289983	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs8135119	0.86[ASN][1000 genomes]
rs8138701	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs8138980	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs886618	0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs9619116	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs9621003	0.87[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs9621016	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829171	chr22:30598030-31043578	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv915818	chr22:30708245-31346302	Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	82 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:30874600-30894000	Weak transcription	Right Atrium	heart
2	chr22:30881800-30890000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr22:30882000-30888400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr22:30882000-30889400	Weak transcription	Spleen	Spleen
5	chr22:30883400-30901200	Weak transcription	A549	lung
6	chr22:30884800-30891200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr22:30886400-30893600	Weak transcription	Lung	lung
8	chr22:30886600-30892000	Strong transcription	Liver	Liver

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