Variant report

Variant rs57535381
Chromosome Location chr20:23338221-23338222
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23336800-23339200 Active TSS ES-I3 Cell Line embryonic stem cell
2 chr20:23336800-23339200 Active TSS H9 Cell Line embryonic stem cell
3 chr20:23336800-23339200 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr20:23336800-23339400 Active TSS HUES6 Cell Line embryonic stem cell
5 chr20:23337000-23338400 Weak transcription Gastric stomach
6 chr20:23337000-23338400 Weak transcription Spleen Spleen
7 chr20:23337600-23338400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
8 chr20:23337600-23338600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr20:23337600-23338600 Flanking Active TSS Dnd41 blood
10 chr20:23337600-23338600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
11 chr20:23337600-23338800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr20:23337600-23339200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr20:23337600-23339200 Active TSS HUES64 Cell Line embryonic stem cell
14 chr20:23337600-23339200 Active TSS Thymus Thymus
15 chr20:23337600-23339400 Active TSS NHLF lung
16 chr20:23337600-23339600 Active TSS Stomach Smooth Muscle stomach
17 chr20:23337800-23338400 Flanking Active TSS Primary B cells from cord blood blood
18 chr20:23337800-23338400 Flanking Active TSS Primary T cells from cord blood blood
19 chr20:23337800-23338400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr20:23337800-23338400 Flanking Active TSS Adipose Nuclei Adipose
21 chr20:23337800-23338400 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
22 chr20:23337800-23338400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
23 chr20:23337800-23338400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
24 chr20:23337800-23338400 Flanking Active TSS HUVEC blood vessel
25 chr20:23337800-23338400 Flanking Active TSS NH-A brain
26 chr20:23337800-23338600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr20:23337800-23338600 Flanking Active TSS Muscle Satellite Cultured Cells --
28 chr20:23337800-23339200 Active TSS HUES48 Cell Line embryonic stem cell
29 chr20:23337800-23339400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr20:23337800-23339600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
31 chr20:23337800-23339800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
32 chr20:23338000-23338400 Flanking Active TSS Primary monocytes fromperipheralblood blood
33 chr20:23338000-23338400 Flanking Active TSS Primary B cells from peripheral blood blood
34 chr20:23338000-23338400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
35 chr20:23338000-23338400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
36 chr20:23338000-23338400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
37 chr20:23338000-23338400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
38 chr20:23338000-23338400 Flanking Active TSS Cortex derived primary cultured neurospheres brain
39 chr20:23338000-23338400 Flanking Active TSS Brain Cingulate Gyrus brain
40 chr20:23338000-23338400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
41 chr20:23338000-23338400 Flanking Active TSS Colon Smooth Muscle Colon
42 chr20:23338000-23338400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
43 chr20:23338000-23338400 Flanking Active TSS Fetal Brain Female brain
44 chr20:23338000-23338400 Flanking Active TSS Fetal Muscle Trunk muscle
45 chr20:23338000-23338400 Flanking Active TSS Placenta Placenta
46 chr20:23338000-23338400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
47 chr20:23338000-23338400 Flanking Active TSS Rectal Smooth Muscle rectum
48 chr20:23338000-23338400 Flanking Active TSS HepG2 liver
49 chr20:23338000-23338400 Flanking Active TSS HSMM muscle
50 chr20:23338000-23338400 Flanking Active TSS Osteobl bone

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