Variant report

Variant	rs575409986
Chromosome Location	chr9:110506840-110506841
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427850	chr9:110456613-110632324	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv428221	chr9:110456613-110632324	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv520911	chr9:110504358-110517794	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv508561	chr9:110506336-110545367	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110496000-110510800	Weak transcription	Aorta	Aorta
2	chr9:110497400-110510800	Weak transcription	Psoas Muscle	Psoas
3	chr9:110500800-110511600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr9:110501000-110507000	Weak transcription	GM12878-XiMat	blood
5	chr9:110501200-110510600	Weak transcription	Brain Anterior Caudate	brain
6	chr9:110502600-110511600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr9:110503000-110510400	Weak transcription	Right Ventricle	heart
8	chr9:110503000-110510600	Weak transcription	Left Ventricle	heart
9	chr9:110503000-110510800	Weak transcription	Placenta	Placenta
10	chr9:110503000-110511400	Weak transcription	NHLF	lung
11	chr9:110504400-110512000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr9:110505200-110509200	Weak transcription	Spleen	Spleen
13	chr9:110505200-110510600	Weak transcription	Adipose Nuclei	Adipose
14	chr9:110505200-110510800	Weak transcription	Fetal Muscle Leg	muscle
15	chr9:110505200-110511400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr9:110505200-110514200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr9:110505600-110509800	Weak transcription	Ovary	ovary
18	chr9:110506600-110507800	Enhancers	Monocytes-CD14+_RO01746	blood
19	chr9:110506800-110507600	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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