Variant report

Variant	rs575413485
Chromosome Location	chr10:93365631-93365632
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93346562..93349330-chr10:93365146..93366773,2	K562	blood:
2	chr10:93363309..93366261-chr10:93366366..93368768,3	K562	blood:
3	chr10:93365300..93367131-chr10:93369836..93371716,2	K562	blood:
4	chr10:93357670..93360937-chr10:93364618..93367584,3	K562	blood:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv551914	chr10:93365015-93384073	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93357600-93368000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr10:93357800-93367600	Weak transcription	Brain Hippocampus Middle	brain
3	chr10:93358400-93366400	Enhancers	Hela-S3	cervix
4	chr10:93358400-93367600	Weak transcription	Brain Anterior Caudate	brain
5	chr10:93361000-93367400	Weak transcription	Psoas Muscle	Psoas
6	chr10:93361200-93366400	Enhancers	Fetal Heart	heart
7	chr10:93362800-93367600	Weak transcription	Right Ventricle	heart
8	chr10:93363200-93365800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr10:93363800-93367400	Weak transcription	Pancreas	Pancrea
10	chr10:93363800-93367600	Weak transcription	Brain Cingulate Gyrus	brain
11	chr10:93364000-93367400	Weak transcription	Aorta	Aorta
12	chr10:93364000-93367400	Weak transcription	Right Atrium	heart
13	chr10:93364000-93367800	Weak transcription	Stomach Mucosa	stomach
14	chr10:93364200-93367400	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr10:93364400-93367400	Weak transcription	Ovary	ovary
16	chr10:93364600-93366200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr10:93364600-93368400	Weak transcription	Gastric	stomach
18	chr10:93364800-93365800	Enhancers	NHDF-Ad	bronchial
19	chr10:93364800-93367400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr10:93364800-93367400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr10:93364800-93367400	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr10:93365200-93367600	Weak transcription	Placenta Amnion	Placenta Amnion
23	chr10:93365400-93367200	Weak transcription	Colon Smooth Muscle	Colon
24	chr10:93365400-93367200	Weak transcription	Rectal Smooth Muscle	rectum
25	chr10:93365400-93367400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
26	chr10:93365400-93367400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr10:93365400-93367400	Weak transcription	Fetal Kidney	kidney
28	chr10:93365400-93367400	Weak transcription	Fetal Lung	lung
29	chr10:93365400-93367800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr10:93365600-93365800	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr10:93365600-93366200	ZNF genes & repeats	HSMMtube	muscle
32	chr10:93365600-93366400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr10:93365600-93367200	Weak transcription	Fetal Stomach	stomach
34	chr10:93365600-93367400	Weak transcription	HSMM	muscle
35	chr10:93365600-93367400	Weak transcription	NHLF	lung
36	chr10:93365600-93367400	Weak transcription	Osteobl	bone
37	chr10:93365600-93373000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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