Variant report

Variant rs5754140
Chromosome Location chr22:32936103-32936104
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32928400-32937600 Weak transcription H1 Cell Line embryonic stem cell
2 chr22:32929000-32940800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr22:32930800-32936200 Weak transcription Colonic Mucosa Colon
4 chr22:32931000-32936200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr22:32931000-32937800 Weak transcription Pancreas Pancrea
6 chr22:32931000-32938200 Weak transcription Colon Smooth Muscle Colon
7 chr22:32931000-32938200 Weak transcription Gastric stomach
8 chr22:32931200-32937800 Weak transcription Fetal Lung lung
9 chr22:32932800-32937800 Weak transcription Stomach Smooth Muscle stomach
10 chr22:32934200-32942200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr22:32934400-32936800 Enhancers HepG2 liver
12 chr22:32934400-32937200 Enhancers Placenta Amnion Placenta Amnion
13 chr22:32934600-32936800 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr22:32934800-32936600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr22:32934800-32937400 Enhancers Hela-S3 cervix
16 chr22:32934800-32938400 Enhancers Adipose Nuclei Adipose
17 chr22:32934800-32939400 Enhancers Fetal Muscle Leg muscle
18 chr22:32935200-32936600 Enhancers K562 blood
19 chr22:32935200-32942800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr22:32935400-32936400 Enhancers Skeletal Muscle Male skeletal muscle
21 chr22:32935400-32936600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr22:32935400-32936600 Enhancers Placenta Placenta
23 chr22:32935400-32936800 Enhancers Fetal Muscle Trunk muscle
24 chr22:32935400-32938200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr22:32935600-32936200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr22:32935600-32936200 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr22:32935600-32936400 Enhancers Fetal Intestine Large intestine
28 chr22:32935600-32936400 Enhancers Sigmoid Colon Sigmoid Colon
29 chr22:32935600-32936600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr22:32935600-32936600 Enhancers Fetal Thymus thymus
31 chr22:32935600-32936800 Enhancers Liver Liver
32 chr22:32935600-32936800 Enhancers Right Atrium heart
33 chr22:32935600-32936800 Enhancers HSMM muscle
34 chr22:32935600-32936800 Enhancers HSMMtube muscle
35 chr22:32935600-32938400 Weak transcription Fetal Heart heart
36 chr22:32935800-32936200 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr22:32935800-32936200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr22:32935800-32936400 Enhancers HUES6 Cell Line embryonic stem cell
39 chr22:32935800-32936400 Enhancers GM12878-XiMat blood
40 chr22:32935800-32936600 Enhancers Lung lung
41 chr22:32935800-32936600 Enhancers Rectal Mucosa Donor 31 rectum
42 chr22:32935800-32936600 Enhancers Spleen Spleen
43 chr22:32935800-32936800 Enhancers Left Ventricle heart
44 chr22:32935800-32938200 Enhancers Skeletal Muscle Female skeletal muscle
45 chr22:32935800-32938400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr22:32935800-32939600 Enhancers Right Ventricle heart
47 chr22:32936000-32936200 Enhancers Fetal Stomach stomach
48 chr22:32936000-32936400 Enhancers Duodenum Mucosa Duodenum

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