Variant report

Variant	rs575567940
Chromosome Location	chr12:120426774-120426775
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MXI1	chr12:120426469-120428138	HepG2	liver:	n/a	n/a
2	E2F6	chr12:120426465-120427347	K562	blood:	n/a	chr12:120426822-120426832 chr12:120426812-120426821 chr12:120426571-120426580 chr12:120426916-120426925 chr12:120426809-120426819 chr12:120427311-120427321
3	POLR2A	chr12:120426383-120427432	MCF-7	breast:	n/a	n/a
4	E2F1	chr12:120426537-120427856	Hela-S3	cervix:	n/a	chr12:120426822-120426832 chr12:120426812-120426821 chr12:120426571-120426580 chr12:120426916-120426925 chr12:120426809-120426819 chr12:120427311-120427321
5	NFIC	chr12:120426531-120427112	ECC-1	luminal epithelium:	n/a	n/a
6	CTCF	chr12:120426684-120426923	GM19239	blood:	n/a	n/a
7	GATA3	chr12:120426605-120426951	T-47D	breast:	n/a	n/a
8	ELK4	chr12:120426646-120427180	Hela-S3	cervix:	n/a	n/a
9	MAX	chr12:120426094-120427990	A549	lung:	n/a	chr12:120426607-120426617 chr12:120426330-120426339
10	TAF1	chr12:120426636-120427250	ECC-1	luminal epithelium:	n/a	n/a
11	CTCF	chr12:120426235-120427312	GM12878	blood:	n/a	chr12:120427019-120427032
12	YY1	chr12:120426591-120427417	HepG2	liver:	n/a	chr12:120427337-120427348 chr12:120426809-120426823 chr12:120426604-120426618 chr12:120426800-120426814 chr12:120427313-120427322 chr12:120426864-120426878 chr12:120426803-120426817 chr12:120426812-120426826 chr12:120426813-120426827
13	POLR2A	chr12:120426319-120427223	HCT-116	colon:	n/a	n/a
14	RAD21	chr12:120426667-120426994	HepG2	liver:	n/a	chr12:120426866-120426878
15	POLR2A	chr12:120426652-120427268	GM18526	blood:	n/a	n/a
16	REST	chr12:120426654-120427543	SK-N-SH	brain:	n/a	chr12:120426995-120427005
17	MYC	chr12:120426457-120426973	K562	blood:	n/a	chr12:120426607-120426617
18	REST	chr12:120426283-120428343	U87	brain:	n/a	chr12:120426284-120426302 chr12:120426568-120426581 chr12:120426291-120426301 chr12:120426604-120426617 chr12:120426995-120427005
19	YY1	chr12:120426467-120427374	K562	blood:	n/a	chr12:120427337-120427348 chr12:120426809-120426823 chr12:120426604-120426618 chr12:120426571-120426580 chr12:120426800-120426814 chr12:120427313-120427322 chr12:120426864-120426878 chr12:120426803-120426817 chr12:120426568-120426582 chr12:120426812-120426826 chr12:120426813-120426827
20	MYC	chr12:120426462-120427020	K562	blood:	n/a	chr12:120426607-120426617
21	ZEB1	chr12:120426293-120427108	HepG2	liver:	n/a	chr12:120426927-120426938 chr12:120426926-120426938
22	NR2F2	chr12:120426299-120427122	MCF-7	breast:	n/a	n/a
23	EGR1	chr12:120426383-120427007	K562	blood:	n/a	chr12:120426797-120426811 chr12:120426801-120426811 chr12:120426801-120426812 chr12:120426607-120426617 chr12:120426571-120426581 chr12:120426606-120426616
24	ELK1	chr12:120426297-120427222	Hela-S3	cervix:	n/a	n/a
25	SMARCB1	chr12:120426344-120428043	Hela-S3	cervix:	n/a	n/a
26	ELK4	chr12:120426733-120427236	HEK293	kidney:	n/a	n/a
27	RFX5	chr12:120426508-120426846	HepG2	liver:	n/a	n/a
28	CTCF	chr12:120426771-120426915	GM12878	blood:	n/a	n/a
29	MAX	chr12:120426503-120427014	K562	blood:	n/a	chr12:120426607-120426617
30	MAX	chr12:120426158-120426994	A549	lung:	n/a	chr12:120426607-120426617 chr12:120426330-120426339
31	CREB1	chr12:120426373-120427938	HepG2	liver:	n/a	n/a
32	UBTF	chr12:120426645-120427913	K562	blood:	n/a	n/a
33	CTCF	chr12:120426720-120426870	HepG2	liver:	n/a	n/a
34	SMC3	chr12:120426774-120426855	K562	blood:	n/a	chr12:120426809-120426819
35	HA-E2F1	chr12:120426277-120428003	MCF-7	breast:	n/a	chr12:120426822-120426832 chr12:120426812-120426821 chr12:120426571-120426580 chr12:120426916-120426925 chr12:120426809-120426819 chr12:120427311-120427321
36	FOXP2	chr12:120426604-120426867	SK-N-MC	brain:	n/a	n/a
37	MAX	chr12:120426147-120428260	MCF-7	breast:	n/a	chr12:120426607-120426617 chr12:120426330-120426339
38	BACH1	chr12:120426133-120427103	H1-hESC	embryonic stem cell:	n/a	n/a
39	CTCF	chr12:120426773-120426926	GM12891	blood:	n/a	n/a
40	ZBTB7A	chr12:120426649-120427489	K562	blood:	n/a	chr12:120426958-120426965
41	HCFC1	chr12:120426191-120427469	Hela-S3	cervix:	n/a	n/a
42	MAX	chr12:120426385-120427986	ECC-1	luminal epithelium:	n/a	chr12:120426607-120426617
43	ZNF263	chr12:120426086-120427432	HEK293-T-REx	kidney:	n/a	chr12:120426367-120426388 chr12:120427333-120427342
44	JUND	chr12:120426503-120427044	A549	lung:	n/a	n/a
45	GABPA	chr12:120426538-120427336	K562	blood:	n/a	chr12:120426571-120426580 chr12:120426607-120426616 chr12:120426916-120426925
46	NRF1	chr12:120426653-120426984	H1-hESC	embryonic stem cell:	n/a	chr12:120426818-120426829 chr12:120426916-120426925
47	E2F6	chr12:120426332-120427065	A549	lung:	n/a	chr12:120426822-120426832 chr12:120426812-120426821 chr12:120426571-120426580 chr12:120426916-120426925 chr12:120426809-120426819
48	PAX5	chr12:120426480-120427361	GM12892	blood:	n/a	chr12:120426980-120427007 chr12:120426935-120426944
49	RUNX3	chr12:120426529-120426977	GM12878	blood:	n/a	n/a
50	E2F4	chr12:120426315-120427093	MCF10A-Er-Src	breast:	n/a	chr12:120426822-120426832 chr12:120426812-120426821 chr12:120426571-120426580 chr12:120426916-120426925 chr12:120426809-120426819

No.	Distal block	Cell Line	Cell type
1	chr12:120425735..120427312-chr12:120553344..120556119,2	MCF-7	breast:
2	chr12:120420153..120423656-chr12:120424541..120427660,4	MCF-7	breast:
3	chr12:120313729..120318058-chr12:120425281..120428238,3	K562	blood:
4	chr12:120425840..120426796-chr20:19097523..19098151,2	MCF-7	breast:
5	chr12:120426493..120428297-chr12:120534910..120538709,3	MCF-7	breast:
6	chr12:120426492..120427432-chr12:120524501..120525382,2	K562	blood:
7	chr12:120426620..120429059-chr12:120727400..120730169,3	MCF-7	breast:
8	chr12:120426746..120427474-chr12:133338037..133338792,2	HCT-116	colon:
9	chr12:120424138..120428272-chr12:120728453..120731316,5	K562	blood:
10	chr12:120425209..120429306-chr12:120552934..120555400,5	MCF-7	breast:
11	chr12:120424699..120427677-chr12:120728453..120732318,6	K562	blood:
12	chr12:120420772..120424084-chr12:120424860..120426963,3	MCF-7	breast:
13	chr12:120425977..120426934-chr12:120517209..120518213,3	MCF-7	breast:
14	chr12:120425404..120428200-chr12:120435927..120438924,2	K562	blood:
15	chr12:120426261..120428229-chr12:120638078..120640091,2	MCF-7	breast:
16	chr12:120426002..120427624-chr12:120517341..120518989,2	MCF-7	breast:
17	chr12:120425546..120427435-chr12:120477512..120479258,2	MCF-7	breast:

Variant related genes	Relation type
CCDC64	TF binding region
ENSG00000255857	Chromatin interaction
ENSG00000089157	Chromatin interaction
ENSG00000200795	Chromatin interaction
ENSG00000176915	Chromatin interaction
ENSG00000135127	Chromatin interaction
ENSG00000122966	Chromatin interaction
ENSG00000202538	Chromatin interaction
ENSG00000111737	Chromatin interaction

Extended variants
information (count: 55 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:55 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv510575	chr12:120303163-120437490	Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	esv3525916	chr12:120345352-120665045	Bivalent Enhancer Genic enhancers Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
3	esv3525917	chr12:120345352-120665045	Weak transcription Enhancers Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
4	nsv899554	chr12:120389613-120513625	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	esv1805506	chr12:120419963-120427915	Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
6	esv1819565	chr12:120419963-120427915	Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
7	esv1830757	chr12:120419963-120427915	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
8	esv1838328	chr12:120419963-120427915	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
9	esv1835423	chr12:120420670-120427915	Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
10	esv1841015	chr12:120420670-120427915	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
11	nsv560399	chr12:120421825-120427177	Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
12	nsv560400	chr12:120421825-120427688	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
13	nsv560401	chr12:120421825-120427915	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
14	nsv560402	chr12:120423472-120427457	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
15	nsv560403	chr12:120423472-120427862	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
16	esv3421380	chr12:120424669-120428967	Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
17	esv3424419	chr12:120426069-120428817	Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
18	esv3327583	chr12:120426194-120428742	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
19	nsv560404	chr12:120426469-120427403	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
20	nsv560405	chr12:120426469-120427457	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
21	nsv560406	chr12:120426469-120427746	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
22	esv1792829	chr12:120426469-120427915	Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
23	esv1798842	chr12:120426469-120427915	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
24	nsv560407	chr12:120426469-120427915	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
25	esv1801020	chr12:120426469-120428468	Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
26	esv1833694	chr12:120426469-120428468	Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
27	esv1836343	chr12:120426469-120428468	Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
28	nsv560408	chr12:120426469-120428468	Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
29	esv1844134	chr12:120426469-120441443	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
30	esv1845761	chr12:120426469-120441443	Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
31	esv3421881	chr12:120426594-120429142	Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
32	esv16207	chr12:120426639-120427988	Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
33	nsv560409	chr12:120426666-120427231	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
34	nsv560410	chr12:120426666-120427746	Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
35	nsv560411	chr12:120426666-120427811	Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
36	nsv560412	chr12:120426666-120427862	Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
37	esv1792848	chr12:120426666-120427915	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
38	esv1793536	chr12:120426666-120427915	Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
39	esv1800282	chr12:120426666-120427915	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
40	esv1803533	chr12:120426666-120427915	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
41	esv1804974	chr12:120426666-120427915	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
42	esv1834686	chr12:120426666-120427915	Flanking Active TSS Active TSS Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
43	esv1837836	chr12:120426666-120427915	Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
44	esv1841377	chr12:120426666-120427915	Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
45	esv1843782	chr12:120426666-120427915	Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
46	esv1850189	chr12:120426666-120427915	Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
47	esv1851652	chr12:120426666-120427915	Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
48	nsv560413	chr12:120426666-120427915	Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription	TF binding region CpG island Chromatin interactive region	10 gene(s)	inside rSNPs	diseases
49	esv1797666	chr12:120426666-120449259	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
50	esv1807589	chr12:120426666-120449259	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120426000-120427400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr12:120426200-120426800	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
3	chr12:120426200-120426800	Flanking Active TSS	Brain Anterior Caudate	brain
4	chr12:120426200-120426800	Flanking Active TSS	Colonic Mucosa	Colon
5	chr12:120426200-120426800	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
6	chr12:120426200-120426800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
7	chr12:120426200-120427000	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr12:120426200-120427400	Flanking Active TSS	Primary B cells from cord blood	blood
9	chr12:120426200-120427400	Flanking Bivalent TSS/Enh	Monocytes-CD14+_RO01746	blood
10	chr12:120426200-120427800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr12:120426200-120427800	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
12	chr12:120426200-120428000	Active TSS	H1 Cell Line	embryonic stem cell
13	chr12:120426200-120428000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr12:120426200-120428000	Active TSS	iPS-15b Cell Line	embryonic stem cell
15	chr12:120426200-120428000	Active TSS	Sigmoid Colon	Sigmoid Colon
16	chr12:120426200-120428200	Active TSS	HUES48 Cell Line	embryonic stem cell
17	chr12:120426200-120428200	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
18	chr12:120426200-120428200	Flanking Active TSS	Primary hematopoietic stem cells	blood
19	chr12:120426200-120428400	Active TSS	Rectal Smooth Muscle	rectum
20	chr12:120426200-120428600	Active TSS	H9 Cell Line	embryonic stem cell
21	chr12:120426200-120429400	Active TSS	Pancreatic Islets	Pancreatic Islet
22	chr12:120426400-120426800	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr12:120426400-120426800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr12:120426400-120426800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
25	chr12:120426400-120426800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr12:120426400-120426800	Bivalent/Poised TSS	Muscle Satellite Cultured Cells	--
27	chr12:120426400-120426800	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
28	chr12:120426400-120426800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr12:120426400-120426800	Flanking Active TSS	Gastric	stomach
30	chr12:120426400-120426800	Flanking Active TSS	Pancreas	Pancrea
31	chr12:120426400-120426800	Flanking Active TSS	Placenta Amnion	Placenta Amnion
32	chr12:120426400-120426800	Flanking Bivalent TSS/Enh	Psoas Muscle	Psoas
33	chr12:120426400-120427000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
34	chr12:120426400-120427000	Flanking Active TSS	Right Ventricle	heart
35	chr12:120426400-120427000	Flanking Active TSS	Dnd41	blood
36	chr12:120426400-120427200	Flanking Active TSS	Stomach Smooth Muscle	stomach
37	chr12:120426400-120427400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr12:120426400-120427400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
39	chr12:120426400-120427400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr12:120426400-120427400	Flanking Active TSS	Liver	Liver
41	chr12:120426400-120427800	Active TSS	ES-I3 Cell Line	embryonic stem cell
42	chr12:120426400-120427800	Active TSS	HUES6 Cell Line	embryonic stem cell
43	chr12:120426400-120427800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
44	chr12:120426400-120427800	Active TSS	Breast Myoepithelial Primary Cells	Breast
45	chr12:120426400-120427800	Active TSS	Primary T cells from cord blood	blood
46	chr12:120426400-120427800	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
47	chr12:120426400-120427800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
48	chr12:120426400-120427800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr12:120426400-120427800	Active TSS	Brain Cingulate Gyrus	brain
50	chr12:120426400-120427800	Active TSS	Brain Inferior Temporal Lobe	brain

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