Variant report

Variant rs575823438
Chromosome Location chr13:96742451-96742452
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96741600-96742600 Bivalent/Poised TSS ES-WA7 Cell Line embryonic stem cell
2 chr13:96741600-96744200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
3 chr13:96741800-96742600 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
4 chr13:96741800-96742600 Bivalent/Poised TSS Brain Dorsolateral Prefrontal Cortex brain
5 chr13:96741800-96742600 Flanking Active TSS Pancreas Pancrea
6 chr13:96741800-96742600 Flanking Bivalent TSS/Enh HUVEC blood vessel
7 chr13:96741800-96743200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr13:96741800-96743400 Bivalent/Poised TSS Brain Germinal Matrix brain
9 chr13:96741800-96743400 Bivalent/Poised TSS Right Ventricle heart
10 chr13:96741800-96743600 Active TSS Brain Substantia Nigra brain
11 chr13:96741800-96744000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr13:96741800-96744400 Bivalent/Poised TSS H9 Cell Line embryonic stem cell
13 chr13:96741800-96744400 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
14 chr13:96741800-96744400 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
15 chr13:96741800-96744600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
16 chr13:96741800-96744600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
17 chr13:96741800-96746000 Active TSS Pancreatic Islets Pancreatic Islet
18 chr13:96742000-96742600 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr13:96742000-96742600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
20 chr13:96742000-96742600 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr13:96742000-96742600 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
22 chr13:96742000-96742600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
23 chr13:96742000-96742600 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
24 chr13:96742000-96742600 Bivalent Enhancer Spleen Spleen
25 chr13:96742000-96742800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr13:96742000-96742800 Flanking Bivalent TSS/Enh HMEC breast
27 chr13:96742000-96743200 Bivalent/Poised TSS Osteobl bone
28 chr13:96742000-96743400 Bivalent/Poised TSS NHLF lung
29 chr13:96742000-96743600 Bivalent/Poised TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:96742000-96743600 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr13:96742000-96743800 Bivalent/Poised TSS A549 lung
32 chr13:96742000-96743800 Bivalent/Poised TSS HSMM muscle
33 chr13:96742000-96744000 Bivalent/Poised TSS Psoas Muscle Psoas
34 chr13:96742000-96744200 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr13:96742000-96744200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
36 chr13:96742000-96744200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
37 chr13:96742000-96744200 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
38 chr13:96742000-96744200 Bivalent/Poised TSS Rectal Smooth Muscle rectum
39 chr13:96742000-96744400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
40 chr13:96742000-96744400 Active TSS Aorta Aorta
41 chr13:96742200-96742600 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
42 chr13:96742200-96742600 Bivalent/Poised TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:96742200-96742600 Flanking Active TSS Liver Liver
44 chr13:96742200-96742600 Bivalent/Poised TSS NHDF-Ad bronchial
45 chr13:96742200-96742800 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr13:96742200-96743200 Bivalent/Poised TSS HSMMtube muscle
47 chr13:96742200-96743400 Bivalent/Poised TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr13:96742200-96743400 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr13:96742200-96743400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
50 chr13:96742200-96743400 Active TSS Fetal Brain Female brain

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