The 2.0 version of rSNPBase

Variant report

Variant rs57665991
Chromosome Location chr3:157841287-157841288
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:157828600-157845800 Weak transcription Spleen Spleen
2 chr3:157828600-157847800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr3:157828600-157857000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr3:157828800-157847600 Weak transcription NH-A brain
5 chr3:157828800-157851000 Weak transcription Right Ventricle heart
6 chr3:157829000-157841400 Weak transcription Duodenum Mucosa Duodenum
7 chr3:157829000-157849400 Weak transcription Placenta Amnion Placenta Amnion
8 chr3:157829200-157841400 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:157829200-157841800 Weak transcription Brain Substantia Nigra brain
10 chr3:157829200-157842000 Weak transcription Psoas Muscle Psoas
11 chr3:157829200-157845400 Weak transcription HMEC breast
12 chr3:157829200-157861400 Weak transcription Rectal Smooth Muscle rectum
13 chr3:157829600-157841400 Weak transcription Primary B cells from cord blood blood
14 chr3:157830000-157841400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr3:157830000-157841400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr3:157830000-157843400 Weak transcription Small Intestine intestine
17 chr3:157830000-157866400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr3:157830200-157841400 Weak transcription HepG2 liver
19 chr3:157830200-157841600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr3:157830400-157845000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr3:157831800-157845800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr3:157833200-157856200 Weak transcription HUES48 Cell Line embryonic stem cell
23 chr3:157835400-157845800 Weak transcription Lung lung
24 chr3:157835600-157846000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr3:157835800-157844400 Weak transcription HUVEC blood vessel
26 chr3:157836000-157851600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr3:157836400-157849400 Weak transcription NHLF lung
28 chr3:157836600-157841800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr3:157836600-157842000 Weak transcription Fetal Brain Male brain
30 chr3:157836600-157854600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr3:157836800-157847400 Weak transcription Colonic Mucosa Colon
32 chr3:157837000-157843400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr3:157837400-157841600 Weak transcription HSMMtube muscle
34 chr3:157837600-157845800 Weak transcription Esophagus oesophagus
35 chr3:157837600-157877600 Weak transcription Fetal Heart heart
36 chr3:157837800-157841400 Weak transcription Brain Germinal Matrix brain
37 chr3:157838200-157842600 Weak transcription K562 blood
38 chr3:157838600-157843400 Weak transcription NHDF-Ad bronchial
39 chr3:157838800-157841600 Weak transcription Brain Inferior Temporal Lobe brain
40 chr3:157838800-157862600 Weak transcription Pancreas Pancrea
41 chr3:157839000-157842800 Weak transcription Brain Cingulate Gyrus brain
42 chr3:157839200-157841800 Weak transcription Aorta Aorta
43 chr3:157839200-157843400 Strong transcription Primary T helper naive cells fromperipheralblood blood
44 chr3:157839600-157844000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr3:157839800-157843800 Strong transcription Dnd41 blood
46 chr3:157839800-157845200 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr3:157839800-157845400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr3:157839800-157845600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr3:157840000-157841600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr3:157840000-157842600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015