Variant report

Variant	rs576698275
Chromosome Location	chr8:35558788-35558789
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017085	chr8:34742896-35594241	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv539546	chr8:34742896-35594241	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv831285	chr8:35485874-35648117	Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv2754662	chr8:35558658-35648958	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:35530200-35562800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr8:35531000-35579600	Weak transcription	Fetal Brain Female	brain
3	chr8:35538000-35575200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr8:35542400-35563800	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:35544200-35563600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr8:35545200-35563800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr8:35547000-35564000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr8:35547200-35563400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr8:35547400-35579800	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr8:35547600-35563800	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr8:35547800-35561800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr8:35547800-35563400	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr8:35550600-35562000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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