Variant report
| Variant | rs57671593 |
|---|---|
| Chromosome Location | chr12:48079144-48079145 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48029800-48098800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr12:48031000-48083200 | Weak transcription | Esophagus | oesophagus |
| 3 | chr12:48040600-48086000 | Weak transcription | Fetal Brain Male | brain |
| 4 | chr12:48043400-48080000 | Weak transcription | NHEK | skin |
| 5 | chr12:48045200-48079200 | Weak transcription | NHLF | lung |
| 6 | chr12:48046600-48083000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 7 | chr12:48046600-48087800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 8 | chr12:48046600-48090000 | Weak transcription | Psoas Muscle | Psoas |
| 9 | chr12:48046600-48097000 | Weak transcription | Brain Angular Gyrus | brain |
| 10 | chr12:48046600-48097600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr12:48046600-48099200 | Weak transcription | Gastric | stomach |
| 12 | chr12:48046800-48079200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 13 | chr12:48046800-48083200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 14 | chr12:48046800-48098600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 15 | chr12:48046800-48099000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 16 | chr12:48050200-48098600 | Weak transcription | Pancreas | Pancrea |
| 17 | chr12:48052000-48094400 | Weak transcription | Aorta | Aorta |
| 18 | chr12:48055200-48083200 | Weak transcription | Brain Germinal Matrix | brain |
| 19 | chr12:48056000-48099000 | Weak transcription | Right Ventricle | heart |
| 20 | chr12:48057200-48098800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 21 | chr12:48058000-48098600 | Weak transcription | Colonic Mucosa | Colon |
| 22 | chr12:48058200-48086000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr12:48058600-48082600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 24 | chr12:48058800-48086000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 25 | chr12:48059800-48083000 | Weak transcription | Fetal Intestine Small | intestine |
| 26 | chr12:48059800-48083200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 27 | chr12:48060400-48083000 | Weak transcription | Spleen | Spleen |
| 28 | chr12:48060400-48088400 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 29 | chr12:48060600-48083000 | Weak transcription | Fetal Stomach | stomach |
| 30 | chr12:48060600-48084200 | Weak transcription | Thymus | Thymus |
| 31 | chr12:48060600-48086000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 32 | chr12:48060600-48094200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 33 | chr12:48060800-48094200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 34 | chr12:48061600-48088600 | Weak transcription | Brain Substantia Nigra | brain |
| 35 | chr12:48062000-48083200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 36 | chr12:48062600-48094200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 37 | chr12:48062800-48098600 | Weak transcription | Colon Smooth Muscle | Colon |
| 38 | chr12:48063000-48086400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 39 | chr12:48063000-48099000 | Weak transcription | Small Intestine | intestine |
| 40 | chr12:48064600-48086000 | Weak transcription | Lung | lung |
| 41 | chr12:48064600-48086000 | Weak transcription | HSMMtube | muscle |
| 42 | chr12:48064600-48099200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 43 | chr12:48064800-48089600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 44 | chr12:48064800-48090000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 45 | chr12:48065000-48092800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 46 | chr12:48065200-48079200 | Weak transcription | Placenta | Placenta |
| 47 | chr12:48066400-48086000 | Weak transcription | Fetal Heart | heart |
| 48 | chr12:48068400-48083200 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 49 | chr12:48068400-48097200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 50 | chr12:48071200-48080200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
