Variant report
| Variant | rs58702884 |
|---|---|
| Chromosome Location | chr12:48039590-48039591 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48007400-48041800 | Weak transcription | HSMMtube | muscle |
| 2 | chr12:48007400-48044800 | Weak transcription | Aorta | Aorta |
| 3 | chr12:48007400-48055400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 4 | chr12:48015600-48055200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 5 | chr12:48016000-48044400 | Weak transcription | NH-A | brain |
| 6 | chr12:48023600-48044800 | Weak transcription | Gastric | stomach |
| 7 | chr12:48029400-48055400 | Weak transcription | Thymus | Thymus |
| 8 | chr12:48029800-48098800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 9 | chr12:48030800-48042000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 10 | chr12:48031000-48044600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 11 | chr12:48031000-48083200 | Weak transcription | Esophagus | oesophagus |
| 12 | chr12:48031200-48051400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr12:48031200-48053200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr12:48031400-48042000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr12:48031400-48042000 | Weak transcription | K562 | blood |
| 16 | chr12:48031400-48044600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 17 | chr12:48031400-48046200 | Weak transcription | Fetal Stomach | stomach |
| 18 | chr12:48031400-48058400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr12:48031600-48044000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 20 | chr12:48031600-48044600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 21 | chr12:48032200-48045800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 22 | chr12:48035000-48044600 | Weak transcription | HSMM | muscle |
| 23 | chr12:48036400-48044600 | Weak transcription | NHDF-Ad | bronchial |
| 24 | chr12:48036600-48055400 | Weak transcription | Ovary | ovary |
| 25 | chr12:48037400-48042200 | Weak transcription | Colon Smooth Muscle | Colon |
| 26 | chr12:48037800-48040000 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 27 | chr12:48038000-48042000 | Weak transcription | Placenta | Placenta |
| 28 | chr12:48038000-48042200 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 29 | chr12:48038200-48039800 | Weak transcription | A549 | lung |
| 30 | chr12:48038200-48044200 | Weak transcription | Osteobl | bone |
| 31 | chr12:48038200-48059400 | Weak transcription | Small Intestine | intestine |
| 32 | chr12:48038400-48044200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr12:48038600-48051400 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 34 | chr12:48038800-48042200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 35 | chr12:48038800-48044600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 36 | chr12:48038800-48045000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 37 | chr12:48038800-48045800 | Weak transcription | Primary T cells from cord blood | blood |
| 38 | chr12:48038800-48046000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr12:48039000-48040200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 40 | chr12:48039000-48041600 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 41 | chr12:48039000-48044600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 42 | chr12:48039000-48052800 | Weak transcription | Dnd41 | blood |
| 43 | chr12:48039200-48044600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 44 | chr12:48039200-48044800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 45 | chr12:48039200-48045000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 46 | chr12:48039200-48046000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 47 | chr12:48039200-48046200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 48 | chr12:48039200-48052800 | Weak transcription | Fetal Intestine Large | intestine |
| 49 | chr12:48039400-48040200 | Strong transcription | Primary B cells from cord blood | blood |
| 50 | chr12:48039400-48040600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
