The 2.0 version of rSNPBase

Variant report

Variant rs57671703
Chromosome Location chr5:115848410-115848411
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115813800-115851000 Weak transcription Liver Liver
2 chr5:115814000-115850200 Weak transcription Small Intestine intestine
3 chr5:115828200-115865400 Weak transcription Primary T cells from cord blood blood
4 chr5:115831200-115851400 Weak transcription HepG2 liver
5 chr5:115831400-115851800 Weak transcription Primary hematopoietic stem cells blood
6 chr5:115835000-115851600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr5:115838400-115850800 Weak transcription Duodenum Mucosa Duodenum
8 chr5:115839000-115855600 Weak transcription Left Ventricle heart
9 chr5:115839000-115856400 Weak transcription HSMMtube muscle
10 chr5:115839600-115859800 Weak transcription Colonic Mucosa Colon
11 chr5:115839800-115856400 Weak transcription Fetal Muscle Trunk muscle
12 chr5:115840600-115853800 Weak transcription Placenta Placenta
13 chr5:115841600-115858000 Enhancers iPS-15b Cell Line embryonic stem cell
14 chr5:115842200-115848800 Enhancers HUES48 Cell Line embryonic stem cell
15 chr5:115843400-115850200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr5:115843400-115850400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr5:115843400-115850600 Weak transcription Fetal Kidney kidney
18 chr5:115843600-115850200 Weak transcription Fetal Brain Female brain
19 chr5:115844200-115850200 Weak transcription Fetal Stomach stomach
20 chr5:115844200-115851400 Weak transcription Rectal Smooth Muscle rectum
21 chr5:115844400-115848800 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr5:115844600-115848600 Enhancers Sigmoid Colon Sigmoid Colon
23 chr5:115844800-115848800 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr5:115844800-115853400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:115845800-115850200 Weak transcription Brain Cingulate Gyrus brain
26 chr5:115845800-115850400 Weak transcription Right Atrium heart
27 chr5:115845800-115853400 Weak transcription Lung lung
28 chr5:115845800-115853600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr5:115845800-115856800 Weak transcription Pancreas Pancrea
30 chr5:115845800-115867200 Weak transcription Right Ventricle heart
31 chr5:115846200-115850200 Weak transcription Brain Anterior Caudate brain
32 chr5:115846200-115855600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr5:115846400-115852600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr5:115846600-115850200 Weak transcription Ovary ovary
35 chr5:115846600-115850400 Weak transcription Brain Inferior Temporal Lobe brain
36 chr5:115846800-115852400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr5:115847200-115848600 Enhancers Fetal Muscle Leg muscle
38 chr5:115847200-115849200 Genic enhancers HUES6 Cell Line embryonic stem cell
39 chr5:115847200-115851400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr5:115847200-115859800 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr5:115847400-115849400 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
42 chr5:115847400-115849600 Enhancers H1 Cell Line embryonic stem cell
43 chr5:115847400-115852600 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr5:115847400-115852600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr5:115847400-115852600 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr5:115847600-115848600 Genic enhancers HUES64 Cell Line embryonic stem cell
47 chr5:115847600-115848600 Genic enhancers Fetal Intestine Small intestine
48 chr5:115847600-115850400 Weak transcription Brain Angular Gyrus brain
49 chr5:115847800-115850600 Weak transcription Cortex derived primary cultured neurospheres brain
50 chr5:115847800-115853400 Weak transcription H9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015