The 2.0 version of rSNPBase

Variant report

Variant rs57686546
Chromosome Location chr4:26916784-26916785
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26880600-26921600 Weak transcription Fetal Muscle Trunk muscle
2 chr4:26886600-26921600 Weak transcription Fetal Muscle Leg muscle
3 chr4:26907000-26917400 Weak transcription Gastric stomach
4 chr4:26907200-26937800 Weak transcription Stomach Mucosa stomach
5 chr4:26909600-26921400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr4:26909600-26923000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr4:26909800-26921400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr4:26910000-26926600 Weak transcription Fetal Stomach stomach
9 chr4:26910200-26921000 Weak transcription Primary monocytes fromperipheralblood blood
10 chr4:26910200-26921000 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr4:26910200-26921200 Weak transcription Primary B cells from cord blood blood
12 chr4:26910200-26925800 Weak transcription NHEK skin
13 chr4:26910400-26921400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:26910800-26921800 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr4:26911000-26917400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr4:26911600-26965800 Weak transcription HMEC breast
17 chr4:26912400-26918800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr4:26912600-26921600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr4:26912800-26919600 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr4:26913000-26920200 Enhancers Primary T cells from cord blood blood
21 chr4:26914000-26923000 Weak transcription Aorta Aorta
22 chr4:26914200-26924200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr4:26914400-26917400 Weak transcription Brain Substantia Nigra brain
24 chr4:26914600-26917400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr4:26914600-26917400 Weak transcription Colon Smooth Muscle Colon
26 chr4:26914600-26917400 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr4:26914600-26921000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr4:26914600-26921600 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr4:26914600-26921600 Weak transcription Fetal Intestine Large intestine
30 chr4:26914600-26921600 Weak transcription Thymus Thymus
31 chr4:26914600-26921800 Weak transcription Fetal Brain Male brain
32 chr4:26914600-26924800 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr4:26914600-26936800 Weak transcription Small Intestine intestine
34 chr4:26914800-26917000 Weak transcription Primary B cells from peripheral blood blood
35 chr4:26914800-26917000 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr4:26914800-26917200 Weak transcription Psoas Muscle Psoas
37 chr4:26914800-26917400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr4:26914800-26917400 Weak transcription Brain Angular Gyrus brain
39 chr4:26914800-26917400 Weak transcription Ovary ovary
40 chr4:26914800-26917400 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr4:26914800-26917600 Weak transcription Brain Hippocampus Middle brain
42 chr4:26914800-26917600 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr4:26914800-26917800 Weak transcription Brain Cingulate Gyrus brain
44 chr4:26914800-26917800 Weak transcription Right Atrium heart
45 chr4:26914800-26920200 Weak transcription Dnd41 blood
46 chr4:26914800-26921000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr4:26914800-26921000 Weak transcription GM12878-XiMat blood
48 chr4:26914800-26921200 Weak transcription Adipose Nuclei Adipose
49 chr4:26914800-26921200 Weak transcription HSMM muscle
50 chr4:26914800-26921400 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015