Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:36816507..36821779-chr5:36874934..36878012,5	K562	blood:
2	chr5:36816507..36818679-chr5:36875920..36877992,2	K562	blood:

Variant related genes	Relation type
ENSG00000164190	Chromatin interaction

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10941319	0.89[ASN][1000 genomes]
rs11743833	0.92[ASN][1000 genomes]
rs11744960	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11745128	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12513653	1.00[ASN][1000 genomes]
rs12516349	0.92[ASN][1000 genomes]
rs12520272	0.85[ASN][1000 genomes]
rs12520324	1.00[ASN][1000 genomes]
rs12521488	1.00[ASN][1000 genomes]
rs16903365	0.96[ASN][1000 genomes]
rs16903373	1.00[ASN][1000 genomes]
rs16903403	0.92[ASN][1000 genomes]
rs16903413	0.92[ASN][1000 genomes]
rs16903419	0.89[ASN][1000 genomes]
rs16903427	0.88[ASN][1000 genomes]
rs16903429	0.88[ASN][1000 genomes]
rs16903442	0.84[ASN][1000 genomes]
rs16903456	0.84[ASN][1000 genomes]
rs2365495	1.00[ASN][1000 genomes]
rs2365838	0.84[ASN][1000 genomes]
rs3776588	0.88[ASN][1000 genomes]
rs3822471	0.88[ASN][1000 genomes]
rs56680779	0.92[ASN][1000 genomes]
rs56999464	1.00[ASN][1000 genomes]
rs60633925	0.83[ASN][1000 genomes]
rs60643425	0.92[ASN][1000 genomes]
rs60730034	0.89[ASN][1000 genomes]
rs62654863	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492319	chr5:36570707-37061019	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv527961	chr5:36781051-36828730	Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv525478	chr5:36804225-37349895	Strong transcription Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36816400-36821000	Weak transcription	K562	blood

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