Variant report

Variant rs576959452
Chromosome Location chr5:180244072-180244073
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:180238200-180245000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:180238800-180253200 Weak transcription A549 lung
3 chr5:180239000-180244800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr5:180239000-180245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:180239000-180247400 Weak transcription Brain Substantia Nigra brain
6 chr5:180239200-180244600 Enhancers K562 blood
7 chr5:180239200-180245000 Weak transcription Colon Smooth Muscle Colon
8 chr5:180239200-180247200 Weak transcription Esophagus oesophagus
9 chr5:180240600-180245800 Enhancers Fetal Thymus thymus
10 chr5:180241400-180244200 Enhancers Fetal Muscle Trunk muscle
11 chr5:180241600-180244600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr5:180241600-180251800 Weak transcription Brain Anterior Caudate brain
13 chr5:180242000-180245000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr5:180242000-180245200 Enhancers Skeletal Muscle Male skeletal muscle
15 chr5:180242000-180245400 Enhancers Primary B cells from peripheral blood blood
16 chr5:180242200-180245000 Enhancers Fetal Kidney kidney
17 chr5:180242200-180245000 Enhancers Skeletal Muscle Female skeletal muscle
18 chr5:180242200-180245600 Enhancers Primary B cells from cord blood blood
19 chr5:180242200-180245600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr5:180242200-180246000 Enhancers Osteobl bone
21 chr5:180242400-180244800 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr5:180242400-180245400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr5:180242600-180244800 Weak transcription Colonic Mucosa Colon
24 chr5:180242600-180245000 Weak transcription Rectal Smooth Muscle rectum
25 chr5:180242600-180245200 Weak transcription Liver Liver
26 chr5:180242600-180245400 Weak transcription Right Ventricle heart
27 chr5:180242600-180246400 Enhancers Fetal Muscle Leg muscle
28 chr5:180242600-180247200 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr5:180242800-180244400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
30 chr5:180242800-180246400 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr5:180243000-180244600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr5:180243000-180244600 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr5:180243000-180245000 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr5:180243000-180245600 Enhancers Primary monocytes fromperipheralblood blood
35 chr5:180243000-180251800 Weak transcription Brain Hippocampus Middle brain
36 chr5:180243200-180244600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr5:180243200-180244600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr5:180243200-180245000 Enhancers Thymus Thymus
39 chr5:180243400-180244200 Enhancers Primary Natural Killer cells fromperipheralblood blood
40 chr5:180243400-180244200 Flanking Active TSS Adipose Nuclei Adipose
41 chr5:180243400-180244400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr5:180243400-180244600 Enhancers HUES64 Cell Line embryonic stem cell
43 chr5:180243400-180244600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr5:180243400-180244600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr5:180243400-180244600 Enhancers Primary mononuclear cells fromperipheralblood Blood
46 chr5:180243400-180245000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr5:180243400-180245200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr5:180243400-180245800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr5:180243600-180244200 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr5:180243600-180244200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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