The 2.0 version of rSNPBase

Variant report

Variant rs57712949
Chromosome Location chr2:234281648-234281649
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234264400-234287200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr2:234264600-234290800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr2:234264600-234307600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr2:234264800-234289200 Weak transcription Esophagus oesophagus
5 chr2:234264800-234292800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr2:234265000-234283800 Weak transcription Thymus Thymus
7 chr2:234265000-234295000 Weak transcription Osteobl bone
8 chr2:234265200-234284000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr2:234265200-234295000 Weak transcription NH-A brain
10 chr2:234265800-234283800 Weak transcription Colonic Mucosa Colon
11 chr2:234265800-234289400 Weak transcription Hela-S3 cervix
12 chr2:234265800-234293000 Weak transcription HMEC breast
13 chr2:234266000-234292400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr2:234266000-234292600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr2:234266000-234293000 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr2:234266400-234294000 Weak transcription Fetal Brain Male brain
17 chr2:234268400-234293400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr2:234268800-234283400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr2:234269200-234293400 Weak transcription Right Atrium heart
20 chr2:234270000-234287600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr2:234270000-234322400 Weak transcription Placenta Amnion Placenta Amnion
22 chr2:234270200-234284000 Weak transcription Psoas Muscle Psoas
23 chr2:234270200-234288800 Weak transcription Right Ventricle heart
24 chr2:234270400-234284200 Weak transcription Fetal Intestine Large intestine
25 chr2:234272600-234282000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr2:234272800-234284200 Weak transcription Liver Liver
27 chr2:234272800-234284200 Weak transcription Fetal Lung lung
28 chr2:234272800-234288600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr2:234272800-234313200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:234273000-234292200 Weak transcription Primary hematopoietic stem cells blood
31 chr2:234273400-234281800 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr2:234273600-234282600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr2:234274000-234295200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr2:234275000-234289800 Weak transcription Pancreas Pancrea
35 chr2:234275200-234288000 Weak transcription Lung lung
36 chr2:234276800-234285200 Genic enhancers Primary B cells from peripheral blood blood
37 chr2:234276800-234285400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr2:234277200-234292600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr2:234277600-234322200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:234278600-234287800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:234278600-234288600 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr2:234278600-234291400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr2:234278600-234292200 Weak transcription Ovary ovary
44 chr2:234278600-234292800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:234278600-234292800 Weak transcription Stomach Smooth Muscle stomach
46 chr2:234278600-234293000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr2:234278600-234293600 Weak transcription Colon Smooth Muscle Colon
48 chr2:234278600-234293800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr2:234278600-234294000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:234278600-234294000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015