Variant report

Variant	rs57764586
Chromosome Location	chr10:98035970-98035971
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	EBF1	chr10:98035864-98036161	GM12878	blood:	n/a	n/a
2	FOXA1	chr10:98035805-98036084	T-47D	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98030298..98031944-chr10:98035782..98037384,2	MCF-7	breast:
2	chr10:98031417..98034385-chr10:98034757..98037553,2	MCF-7	breast:

Variant related genes	Relation type
BLNK	TF binding region
ENSG00000095585	Chromatin interaction

rs_ID	r²[population]
rs10882764	1.00[EUR][1000 genomes]
rs11188685	1.00[EUR][1000 genomes]
rs12249494	1.00[EUR][1000 genomes]
rs12260882	1.00[EUR][1000 genomes]
rs28576546	1.00[EUR][1000 genomes]
rs60628200	1.00[EUR][1000 genomes]
rs73318815	1.00[EUR][1000 genomes]
rs73318819	1.00[EUR][1000 genomes]
rs73318823	1.00[EUR][1000 genomes]
rs73318827	1.00[EUR][1000 genomes]
rs7900787	1.00[EUR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:98032400-98047200	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:98033000-98036200	Weak transcription	Colonic Mucosa	Colon
3	chr10:98033400-98037800	Enhancers	Primary B cells from peripheral blood	blood
4	chr10:98033600-98037400	Enhancers	Primary B cells from cord blood	blood
5	chr10:98034200-98042200	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr10:98034400-98036400	Enhancers	GM12878-XiMat	blood
7	chr10:98034600-98036400	Enhancers	Rectal Mucosa Donor 29	rectum
8	chr10:98035200-98036400	Enhancers	Liver	Liver
9	chr10:98035200-98036400	Enhancers	Left Ventricle	heart
10	chr10:98035200-98036400	Enhancers	Right Ventricle	heart
11	chr10:98035200-98036600	Enhancers	Pancreas	Pancrea
12	chr10:98035200-98037400	Enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr10:98035200-98037400	Enhancers	HMEC	breast
14	chr10:98035200-98037600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr10:98035400-98036200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr10:98035400-98036200	Enhancers	Adipose Nuclei	Adipose
17	chr10:98035400-98036600	Enhancers	Duodenum Mucosa	Duodenum
18	chr10:98035400-98036600	Enhancers	Rectal Mucosa Donor 31	rectum
19	chr10:98035400-98037000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr10:98035400-98037200	Enhancers	NHEK	skin
21	chr10:98035600-98036000	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr10:98035600-98036200	Enhancers	Colon Smooth Muscle	Colon
23	chr10:98035600-98036200	Enhancers	Fetal Kidney	kidney
24	chr10:98035600-98036200	Enhancers	Stomach Mucosa	stomach
25	chr10:98035600-98036400	Enhancers	Fetal Intestine Large	intestine
26	chr10:98035600-98036400	Enhancers	Gastric	stomach
27	chr10:98035600-98036400	Enhancers	Stomach Smooth Muscle	stomach
28	chr10:98035600-98036400	Enhancers	Dnd41	blood
29	chr10:98035600-98036600	Enhancers	Fetal Intestine Small	intestine
30	chr10:98035600-98037000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr10:98035600-98037400	Enhancers	Esophagus	oesophagus
32	chr10:98035800-98036000	Enhancers	Thymus	Thymus
33	chr10:98035800-98036200	Enhancers	Brain Inferior Temporal Lobe	brain
34	chr10:98035800-98036400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
35	chr10:98035800-98036400	Enhancers	Right Atrium	heart
36	chr10:98035800-98036600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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