The 2.0 version of rSNPBase

Variant report

Variant rs57771832
Chromosome Location chr13:95797705-95797706
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95727000-95812000 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr13:95750400-95812400 Weak transcription Duodenum Mucosa Duodenum
3 chr13:95750400-95815400 Weak transcription Fetal Intestine Large intestine
4 chr13:95752200-95823200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr13:95752200-95844200 Weak transcription Rectal Smooth Muscle rectum
6 chr13:95756400-95828200 Weak transcription HSMM muscle
7 chr13:95757600-95814400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr13:95762200-95817200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr13:95762400-95811800 Weak transcription K562 blood
10 chr13:95768200-95806600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr13:95768200-95819000 Weak transcription Fetal Intestine Small intestine
12 chr13:95774600-95815800 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr13:95778800-95799200 Weak transcription Colon Smooth Muscle Colon
14 chr13:95778800-95833400 Weak transcription Spleen Spleen
15 chr13:95781000-95802400 Weak transcription Muscle Satellite Cultured Cells --
16 chr13:95782000-95828000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr13:95783400-95803800 Weak transcription Fetal Lung lung
18 chr13:95787800-95827200 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr13:95789200-95812400 Weak transcription Aorta Aorta
20 chr13:95789200-95817600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr13:95790000-95798800 Weak transcription HSMMtube muscle
22 chr13:95790000-95806600 Weak transcription NH-A brain
23 chr13:95790200-95812000 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr13:95791000-95821400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr13:95791800-95802400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr13:95792200-95805800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr13:95792400-95801400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr13:95792600-95799200 Weak transcription A549 lung
29 chr13:95792600-95804000 Weak transcription Primary T cells from cord blood blood
30 chr13:95792600-95809200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr13:95792600-95811800 Weak transcription Lung lung
32 chr13:95792600-95813400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr13:95792600-95817000 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr13:95792800-95810400 Weak transcription NHLF lung
35 chr13:95792800-95815800 Weak transcription Stomach Smooth Muscle stomach
36 chr13:95793200-95809600 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr13:95794200-95811600 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr13:95795600-95802200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr13:95796400-95798000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr13:95796600-95798200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr13:95797400-95798600 ZNF genes & repeats GM12878-XiMat blood

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Last update: Aug 31, 2015