Variant report

Variant	rs577882360
Chromosome Location	chr11:83659628-83659629
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898025	chr11:83658909-83796678	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83629800-83661800	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:83649200-83662400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr11:83650400-83662400	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83658400-83660200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr11:83658600-83660400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr11:83659000-83660000	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr11:83659200-83660000	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr11:83659200-83660000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr11:83659200-83660600	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr11:83659600-83660000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr11:83659600-83660000	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr11:83659600-83660000	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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