Variant report

Variant rs57814798
Chromosome Location chr12:8852913-8852914
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:8849600-8853000 Active TSS Brain Inferior Temporal Lobe brain
2 chr12:8851400-8853200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr12:8851400-8853200 Enhancers Fetal Heart heart
4 chr12:8851400-8862000 Weak transcription Gastric stomach
5 chr12:8851600-8853000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr12:8851600-8855600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr12:8851600-8862000 Weak transcription Lung lung
8 chr12:8851800-8853000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:8851800-8853000 Enhancers Primary monocytes fromperipheralblood blood
10 chr12:8851800-8853000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr12:8851800-8853000 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr12:8851800-8853000 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr12:8851800-8853000 Enhancers Monocytes-CD14+_RO01746 blood
14 chr12:8851800-8853200 Enhancers Fetal Intestine Small intestine
15 chr12:8851800-8853200 Enhancers Fetal Thymus thymus
16 chr12:8851800-8853200 Weak transcription Right Atrium heart
17 chr12:8851800-8853200 Enhancers Thymus Thymus
18 chr12:8851800-8853200 Enhancers Osteobl bone
19 chr12:8851800-8853400 Enhancers Fetal Stomach stomach
20 chr12:8851800-8854600 Weak transcription Brain Substantia Nigra brain
21 chr12:8851800-8855600 Weak transcription Brain Angular Gyrus brain
22 chr12:8851800-8859800 Weak transcription Spleen Spleen
23 chr12:8851800-8862000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:8851800-8862000 Weak transcription Left Ventricle heart
25 chr12:8851800-8862000 Weak transcription HSMM muscle
26 chr12:8851800-8862000 Weak transcription HSMMtube muscle
27 chr12:8851800-8863400 Weak transcription Right Ventricle heart
28 chr12:8851800-8873200 Weak transcription Fetal Muscle Trunk muscle
29 chr12:8851800-8877200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr12:8852000-8853000 Enhancers Primary T cells from cord blood blood
31 chr12:8852000-8853000 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr12:8852000-8853000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr12:8852000-8853000 Enhancers A549 lung
34 chr12:8852000-8853200 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr12:8852000-8853200 Enhancers Primary B cells from cord blood blood
36 chr12:8852000-8853600 Enhancers Duodenum Smooth Muscle Duodenum
37 chr12:8852000-8853800 Enhancers Brain Hippocampus Middle brain
38 chr12:8852000-8855000 Enhancers Fetal Brain Male brain
39 chr12:8852000-8855200 Weak transcription Fetal Kidney kidney
40 chr12:8852000-8861800 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr12:8852200-8853000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
42 chr12:8852200-8853000 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
43 chr12:8852200-8853000 Flanking Active TSS Fetal Brain Female brain
44 chr12:8852200-8853200 Flanking Active TSS Adipose Nuclei Adipose
45 chr12:8852200-8853200 Genic enhancers Fetal Adrenal Gland Adrenal Gland
46 chr12:8852200-8853400 Genic enhancers Dnd41 blood
47 chr12:8852400-8853200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:8852400-8853200 Enhancers Psoas Muscle Psoas
49 chr12:8852400-8853400 Enhancers Brain Anterior Caudate brain
50 chr12:8852400-8853400 Enhancers Fetal Lung lung

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