Variant report

Variant	rs578169975
Chromosome Location	chr8:90255732-90255733
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv465735	chr8:89760311-90729507	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	nsv611714	chr8:89760311-90729507	Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Weak transcription Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
3	nsv1024956	chr8:90104423-90459539	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
4	nsv539671	chr8:90104423-90459539	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
5	nsv1032886	chr8:90253748-90398240	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a
6	nsv967614	chr8:90254895-90256004	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:90248600-90259600	Enhancers	Primary T helper cells PMA-I stimulated	--
2	chr8:90250000-90259600	Enhancers	Primary T helper naive cells from peripheral blood	blood
3	chr8:90251400-90259400	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr8:90251800-90257400	Enhancers	Dnd41	blood
5	chr8:90253400-90257200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
6	chr8:90253800-90257000	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
7	chr8:90254600-90258200	Enhancers	Primary T killer memory cells from peripheral blood	blood
8	chr8:90254800-90256400	Enhancers	Primary T cells fromperipheralblood	blood
9	chr8:90255200-90255800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr8:90255400-90256000	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
11	chr8:90255400-90256800	Flanking Active TSS	Primary T cells from cord blood	blood
12	chr8:90255600-90255800	Enhancers	NHDF-Ad	bronchial
13	chr8:90255600-90256200	Enhancers	Primary hematopoietic stem cells short term culture	blood
14	chr8:90255600-90256400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
15	chr8:90255600-90256400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:90255600-90256400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr8:90255600-90256400	Enhancers	Muscle Satellite Cultured Cells	--
18	chr8:90255600-90256400	Enhancers	NH-A	brain
19	chr8:90255600-90256600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
20	chr8:90255600-90256600	Enhancers	Osteobl	bone
21	chr8:90255600-90256800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--

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